RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 A0A1W2PRD5 423 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 A0A1W2PRF3 423 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 A0A1W2PRM7 423 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 J3KTA2 159 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 DCTN6O00399 190 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 NDUFB2O95178 105 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 GRPP07492 148 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 DUX4L2P0CJ85 424 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 DUX4L3P0CJ86 424 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 DUX4L4P0CJ87 422 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 DUX4L5P0CJ88 424 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 DUX4L6P0CJ89 424 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 DUX4L7P0CJ90 424 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 GPR4P46093 362 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 DLX1P56177 255 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 PRB3Q04118 309 aaPredicted RBP13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 MZT1Q08AG7 82 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 TRAP1Q12931 704 aaKnown RBP13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 MICBQ29980 383 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 DUX4L9Q6RFH8 374 aaPredicted RBP13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 C11orf53Q8IXP5 236 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 TSSK2Q96PF2 358 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 PITX2Q99697 317 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 SSX3Q99909 188 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 MEGF9Q9H1U4 602 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 MMP28Q9H239 520 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 RNPEPL1Q9HAU8 725 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 PNRC2Q9NPJ4 139 aaKnown RBP13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 DUX4Q9UBX2 424 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 B9D1Q9UPM9 204 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 SIGLEC7Q9Y286 467 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 IER3IP1Q9Y5U9 82 aa13.65□□□□□ -0.22
CHCHD3-202ENST00000423635 IGLV1-36A0A0B4J1U3 117 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 SOCS2O14508 198 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 GGT2P36268 569 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 TGM4P49221 684 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 CENPAP49450 140 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 TPTEP56180 551 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 ZNF92Q03936 586 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 KLRD1Q13241 179 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 AANATQ16613 207 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 LRRC23Q53EV4 343 aaPredicted RBP13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 WDR38Q5JTN6 314 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 C11orf87Q6NUJ2 197 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 DNM1P34Q6PK57 102 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 SLC36A1Q7Z2H8 476 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 PNKDQ8N490 385 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 WFDC9Q8NEX5 89 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 SLC26A10Q8NG04 563 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 OR4F17Q8NGA8 305 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 OR4F4Q96R69 305 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 TMBIM4Q9HC24 238 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 RAB18Q9NP72 206 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 C14orf119Q9NWQ9 140 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 DNAJB11Q9UBS4 358 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 CYB5R1Q9UHQ9 305 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 hCG_1807616A0A1W2PRN6 198 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 MEGF11A6BM72 1044 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 GGT3PA6NGU5 568 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 A6NLC8 198 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 FXYD1O00168 92 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 MPIG6BO95866 241 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 VSIG10L2P0DP72 767 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 ELF3P78545 371 aaPredicted RBP13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 PCK2Q16822 640 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 NSUN5P1Q3KNT7 163 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 ATPAF1Q5TC12 328 aaPredicted RBP13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 NCR3LG1Q68D85 454 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 DPY19L2P2Q6ZN68 376 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 NDUFA11Q86Y39 141 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 LINC00346Q8IVM7 164 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 OR6V1Q8N148 313 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 LYG1Q8N1E2 194 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 LZICQ8WZA0 190 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 C12orf43Q96C57 262 aaKnown RBP13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 AJUBAQ96IF1 538 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 CLPTM1LQ96KA5 538 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 TMEM5Q9Y2B1 443 aa13.64□□□□□ -0.23
CHCHD3-202ENST00000423635 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.63□□□□□ -0.23
CHCHD3-202ENST00000423635 K7EIL1 84 aa13.63□□□□□ -0.23
CHCHD3-202ENST00000423635 BHLHE40O14503 412 aa13.63□□□□□ -0.23
CHCHD3-202ENST00000423635 NDUFB3O43676 98 aa13.63□□□□□ -0.23
CHCHD3-202ENST00000423635 FBXO24O75426 580 aa13.63□□□□□ -0.23
CHCHD3-202ENST00000423635 NPPAP01160 153 aa13.63□□□□□ -0.23
CHCHD3-202ENST00000423635 IFNW1P05000 195 aa13.63□□□□□ -0.23
CHCHD3-202ENST00000423635 AMY2BP19961 511 aa13.63□□□□□ -0.23
CHCHD3-202ENST00000423635 GRK5P34947 590 aa13.63□□□□□ -0.23
CHCHD3-202ENST00000423635 RPS6KA3P51812 740 aa13.63□□□□□ -0.23
CHCHD3-202ENST00000423635 FXYD6P3P58550 94 aa13.63□□□□□ -0.23
CHCHD3-202ENST00000423635 RFX4Q33E94 735 aa13.63□□□□□ -0.23
CHCHD3-202ENST00000423635 SNAI3Q3KNW1 292 aa13.63□□□□□ -0.23
CHCHD3-202ENST00000423635 SLC36A3Q495N2 470 aa13.63□□□□□ -0.23
CHCHD3-202ENST00000423635 RRM2BQ7LG56 351 aa13.63□□□□□ -0.23
CHCHD3-202ENST00000423635 FAM216BQ8N7L0 139 aa13.63□□□□□ -0.23
CHCHD3-202ENST00000423635 OR2AJ1Q8NGZ0 328 aa13.63□□□□□ -0.23
CHCHD3-202ENST00000423635 SLC7A13Q8TCU3 470 aa13.63□□□□□ -0.23
CHCHD3-202ENST00000423635 R3HDM4Q96D70 268 aa13.63□□□□□ -0.23
CHCHD3-202ENST00000423635 ANKRD19PQ9H560 264 aa13.63□□□□□ -0.23
CHCHD3-202ENST00000423635 METTL8Q9H825 291 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms