RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 PCGF3Q3KNV8 242 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 SLC36A3Q495N2 470 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 C10orf128Q5T292 105 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 C11orf71Q6IPW1 123 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 LIN54Q6MZP7 749 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 RPL13AP3Q6NVV1 102 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 SLC25A47Q6Q0C1 308 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 SMARCD3Q6STE5 483 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 B3GLCTQ6Y288 498 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 ADCK1Q86TW2 530 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 MEX3DQ86XN8 651 aaKnown RBP4.8□□□□□ -1.64
LINC00458-201ENST00000423442 ZNF525Q8N782 197 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 OR52L1Q8NGH7 329 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 OR5L1Q8NGL2 311 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 OR1J1Q8NGS3 322 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 OR13C2Q8NGS9 318 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 OR2AJ1Q8NGZ0 328 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 SLC7A13Q8TCU3 470 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 GNPDA2Q8TDQ7 276 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 C10orf105Q8TEF2 133 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 MRPL24Q96A35 216 aaKnown RBP4.8□□□□□ -1.64
LINC00458-201ENST00000423442 C7orf34Q96L11 122 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 COG8Q96MW5 612 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 ERMAPQ96PL5 475 aaPredicted RBP4.8□□□□□ -1.64
LINC00458-201ENST00000423442 DOK1Q99704 481 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 TEX12Q9BXU0 123 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 TRIM15Q9C019 465 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 EGLN1Q9GZT9 426 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 OR51B6Q9H340 312 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 MUC13Q9H3R2 512 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 IL1RAPQ9NPH3 570 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 TUBG2Q9NRH3 451 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 CYSLTR2Q9NS75 346 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 TAAR3PQ9P1P4 343 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 ACTR3BQ9P1U1 418 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 KIF17Q9P2E2 1029 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 CD300AQ9UGN4 299 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 POLR1DQ9Y2S0 133 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 GRIP1Q9Y3R0 1128 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 TGP01266 2768 aa4.8□□□□□ -1.64
LINC00458-201ENST00000423442 IGHV4-30-2A0A087WSY4 118 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 PRSS37A4D1T9 235 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 TNFRSF11BO00300 401 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 CDC42EP2O14613 210 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 IMPA2O14732 288 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 ARPC2O15144 300 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 SGCEO43556 437 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 GPRIN2O60269 458 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 PTP4A3O75365 173 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 CCNB2O95067 398 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 SNAP29O95721 258 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 TGFAP01135 160 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 IGHMP01871 453 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 CCL2P13500 99 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 ZNF823P16415 610 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 ZNF32P17041 273 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 GSTM3P21266 225 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 PCMT1P22061 227 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 RASSF2P50749 326 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 ZNF133P52736 654 aaPredicted RBP4.79□□□□□ -1.64
LINC00458-201ENST00000423442 CDH15P55291 814 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 CCL8P80075 99 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 PSG4Q00888 419 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 GLO1Q04760 184 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 FMODQ06828 376 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 SCRN3Q0VDG4 424 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 HFEQ30201 348 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 RFX4Q33E94 735 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 FAM166AQ6J272 317 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 COLCA1Q6ZS62 124 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 CPOQ8IVL8 374 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 ZCCHC24Q8N2G6 241 aaKnown RBP4.79□□□□□ -1.64
LINC00458-201ENST00000423442 ZNF786Q8N393 782 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 GJC3Q8NFK1 279 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 AKR7LQ8NHP1 331 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 BCAS4Q8TDM0 211 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 IPCEF1Q8WWN9 437 aaPredicted RBP4.79□□□□□ -1.64
LINC00458-201ENST00000423442 RDH5Q92781 318 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 NMD3Q96D46 503 aaKnown RBP4.79□□□□□ -1.64
LINC00458-201ENST00000423442 TIMD4Q96H15 378 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 RSRC1Q96IZ7 334 aaKnown RBP4.79□□□□□ -1.64
LINC00458-201ENST00000423442 C4orf45Q96LM5 186 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 Q96M85 177 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 TSPAN32Q96QS1 320 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 THTPAQ9BU02 230 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 ZNF416Q9BWM5 594 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 MRPL37Q9BZE1 423 aaKnown RBP4.79□□□□□ -1.64
LINC00458-201ENST00000423442 OR2H1Q9GZK4 316 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 SHARPINQ9H0F6 387 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 FAM234AQ9H0X4 552 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 C1orf21Q9H246 121 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 YY1AP1Q9H869 796 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 REEP1Q9H902 201 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 ZNF556Q9HAH1 456 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 HINT3Q9NQE9 182 aaKnown RBP4.79□□□□□ -1.64
LINC00458-201ENST00000423442 MAN2C1Q9NTJ4 1040 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 PLEK2Q9NYT0 353 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 FZR1Q9UM11 496 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 SIGLEC7Q9Y286 467 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 ADAM18Q9Y3Q7 739 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms