RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 ZNF404Q494X3 552 aa12.95□□□□□ -0.34
SPC24-201ENST00000423327 C19orf18Q8NEA5 215 aa12.95□□□□□ -0.34
SPC24-201ENST00000423327 OTOSQ8NHW6 89 aa12.95□□□□□ -0.34
SPC24-201ENST00000423327 DACT3Q96B18 629 aaPredicted RBP12.95□□□□□ -0.34
SPC24-201ENST00000423327 TMEM246Q9BRR3 403 aa12.95□□□□□ -0.34
SPC24-201ENST00000423327 PPP1R3EQ9H7J1 279 aa12.95□□□□□ -0.34
SPC24-201ENST00000423327 YY1AP1Q9H869 796 aa12.95□□□□□ -0.34
SPC24-201ENST00000423327 UFSP2Q9NUQ7 469 aa12.95□□□□□ -0.34
SPC24-201ENST00000423327 DNAJC27Q9NZQ0 273 aa12.95□□□□□ -0.34
SPC24-201ENST00000423327 PCDHB10Q9UN67 800 aa12.95□□□□□ -0.34
SPC24-201ENST00000423327 N6AMT1Q9Y5N5 214 aa12.95□□□□□ -0.34
SPC24-201ENST00000423327 hCG_38984A0A1B0GV85 526 aa12.94□□□□□ -0.34
SPC24-201ENST00000423327 GGT3PA6NGU5 568 aa12.94□□□□□ -0.34
SPC24-201ENST00000423327 PRR32B1ATL7 298 aa12.94□□□□□ -0.34
SPC24-201ENST00000423327 M0R129 80 aa12.94□□□□□ -0.34
SPC24-201ENST00000423327 PRODHO43272 600 aa12.94□□□□□ -0.34
SPC24-201ENST00000423327 XRCC2O43543 280 aa12.94□□□□□ -0.34
SPC24-201ENST00000423327 MITFO75030 526 aaPredicted RBP12.94□□□□□ -0.34
SPC24-201ENST00000423327 RGS9O75916 674 aaPredicted RBP12.94□□□□□ -0.34
SPC24-201ENST00000423327 FSTL3O95633 263 aa12.94□□□□□ -0.34
SPC24-201ENST00000423327 ZNF12P17014 697 aa12.94□□□□□ -0.34
SPC24-201ENST00000423327 PAICSP22234 425 aaKnown RBP12.94□□□□□ -0.34
SPC24-201ENST00000423327 GATA3P23771 443 aa12.94□□□□□ -0.34
SPC24-201ENST00000423327 NAA10P41227 235 aaPredicted RBP12.94□□□□□ -0.34
SPC24-201ENST00000423327 ZNF121P58317 390 aaPredicted RBP12.94□□□□□ -0.34
SPC24-201ENST00000423327 FAM3AP98173 230 aa12.94□□□□□ -0.34
SPC24-201ENST00000423327 TAF13Q15543 124 aa12.94□□□□□ -0.34
SPC24-201ENST00000423327 SHFQ7M4L6 423 aa12.94□□□□□ -0.34
SPC24-201ENST00000423327 SLC16A9Q7RTY1 509 aa12.94□□□□□ -0.34
SPC24-201ENST00000423327 WDR86Q86TI4 376 aa12.94□□□□□ -0.34
SPC24-201ENST00000423327 MUC20Q8N307 709 aaPredicted RBP12.94□□□□□ -0.34
SPC24-201ENST00000423327 SGK3Q96BR1 496 aa12.94□□□□□ -0.34
SPC24-201ENST00000423327 NRBF2Q96F24 287 aa12.94□□□□□ -0.34
SPC24-201ENST00000423327 C7orf69Q9H7B7 122 aa12.94□□□□□ -0.34
SPC24-201ENST00000423327 ZNF556Q9HAH1 456 aa12.94□□□□□ -0.34
SPC24-201ENST00000423327 MRPL15Q9P015 296 aaKnown RBP12.94□□□□□ -0.34
SPC24-201ENST00000423327 TBX1O43435 398 aa12.93□□□□□ -0.34
SPC24-201ENST00000423327 HMGN1P05114 100 aa12.93□□□□□ -0.34
SPC24-201ENST00000423327 ANXA2P07355 339 aaKnown RBP12.93□□□□□ -0.34
SPC24-201ENST00000423327 HSD11B1P28845 292 aa12.93□□□□□ -0.34
SPC24-201ENST00000423327 EPHA2P29317 976 aa12.93□□□□□ -0.34
SPC24-201ENST00000423327 CRISP1P54107 249 aa12.93□□□□□ -0.34
SPC24-201ENST00000423327 ATP6AP1Q15904 470 aa12.93□□□□□ -0.34
SPC24-201ENST00000423327 TUSC1Q2TAM9 212 aa12.93□□□□□ -0.34
SPC24-201ENST00000423327 KLF17Q5JT82 389 aaPredicted RBP12.93□□□□□ -0.34
SPC24-201ENST00000423327 LYPD2Q6UXB3 125 aa12.93□□□□□ -0.34
SPC24-201ENST00000423327 FAM57BQ71RH2 274 aa12.93□□□□□ -0.34
SPC24-201ENST00000423327 KLBQ86Z14 1044 aa12.93□□□□□ -0.34
SPC24-201ENST00000423327 PARP8Q8N3A8 854 aa12.93□□□□□ -0.34
SPC24-201ENST00000423327 OR5K1Q8NHB7 308 aa12.93□□□□□ -0.34
SPC24-201ENST00000423327 TOR3AQ9H497 397 aa12.93□□□□□ -0.34
SPC24-201ENST00000423327 OCEL1Q9H607 264 aa12.93□□□□□ -0.34
SPC24-201ENST00000423327 OPA3Q9H6K4 179 aa12.93□□□□□ -0.34
SPC24-201ENST00000423327 PAPOLBQ9NRJ5 636 aaKnown RBP12.93□□□□□ -0.34
SPC24-201ENST00000423327 LRCH1Q9Y2L9 728 aa12.93□□□□□ -0.34
SPC24-201ENST00000423327 INSIG2Q9Y5U4 225 aa12.93□□□□□ -0.34
SPC24-201ENST00000423327 FBN3Q75N90 2809 aa12.93□□□□□ -0.34
SPC24-201ENST00000423327 PRKYO43930 277 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 GMDSO60547 372 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 LYNP07948 512 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 RPS2P15880 293 aaKnown RBP12.92□□□□□ -0.34
SPC24-201ENST00000423327 SLC15A1P46059 708 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 HCCSP53701 268 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 ZNF154Q13106 437 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 APOFQ13790 326 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 PTGES3Q15185 160 aaKnown RBP12.92□□□□□ -0.34
SPC24-201ENST00000423327 ESCO2Q56NI9 601 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 SLC35D3Q5M8T2 416 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 ZNF841Q6ZN19 808 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 ZNF826PQ6ZT77 177 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 RHOUQ7L0Q8 258 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 BCDIN3DQ7Z5W3 292 aaKnown RBP12.92□□□□□ -0.34
SPC24-201ENST00000423327 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.92□□□□□ -0.34
SPC24-201ENST00000423327 DNAJC9Q8WXX5 260 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 ERGIC1Q969X5 290 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 DUS3LQ96G46 650 aaKnown RBP12.92□□□□□ -0.34
SPC24-201ENST00000423327 REEP6Q96HR9 211 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 LYZL4Q96KX0 146 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 SLC6A7Q99884 636 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 SLC22A4Q9H015 551 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 BRD7Q9NPI1 651 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 TVP23BQ9NYZ1 205 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 KIF17Q9P2E2 1029 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 CTSZQ9UBR2 303 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 PPIAL4AQ9Y536 164 aa12.92□□□□□ -0.34
SPC24-201ENST00000423327 LRRC30A6NM36 301 aa12.91□□□□□ -0.34
SPC24-201ENST00000423327 FCN3O75636 299 aa12.91□□□□□ -0.34
SPC24-201ENST00000423327 H2BFMP0C1H6 154 aa12.91□□□□□ -0.34
SPC24-201ENST00000423327 ALOX5APP20292 161 aa12.91□□□□□ -0.34
SPC24-201ENST00000423327 ACKR3P25106 362 aa12.91□□□□□ -0.34
SPC24-201ENST00000423327 CD80P33681 288 aa12.91□□□□□ -0.34
SPC24-201ENST00000423327 HILS1P60008 231 aa12.91□□□□□ -0.34
SPC24-201ENST00000423327 SNAPC1Q16533 368 aa12.91□□□□□ -0.34
SPC24-201ENST00000423327 LIPNQ5VXI9 398 aa12.91□□□□□ -0.34
SPC24-201ENST00000423327 KDM4DQ6B0I6 523 aa12.91□□□□□ -0.34
SPC24-201ENST00000423327 LRRN1Q6UXK5 716 aa12.91□□□□□ -0.34
SPC24-201ENST00000423327 AMIGO2Q86SJ2 522 aa12.91□□□□□ -0.34
SPC24-201ENST00000423327 C11orf53Q8IXP5 236 aa12.91□□□□□ -0.34
SPC24-201ENST00000423327 C1orf87Q8N0U7 546 aa12.91□□□□□ -0.34
SPC24-201ENST00000423327 GCSAMQ8N6F7 178 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms