RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 TEX29Q8N6K0 151 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 ZNF511Q8NB15 262 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 DEFB108BQ8NET1 73 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 OR6K6Q8NGW6 343 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 EME1Q96AY2 570 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 ZNF799Q96GE5 643 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 SLC6A7Q99884 636 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 OR51V1Q9H2C8 321 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 KCNG2Q9UJ96 466 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 ORC6Q9Y5N6 252 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 COMMD3-BMI1R4GMX3 469 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 A0A1B0GWJ7 208 aa12.74□□□□□ -0.37
USB1-202ENST00000423271 CEACAM18A8MTB9 384 aa12.74□□□□□ -0.37
USB1-202ENST00000423271 GLCEO94923 617 aa12.74□□□□□ -0.37
USB1-202ENST00000423271 PMELP40967 661 aa12.74□□□□□ -0.37
USB1-202ENST00000423271 SLC6A9P48067 706 aa12.74□□□□□ -0.37
USB1-202ENST00000423271 RAD23AP54725 363 aa12.74□□□□□ -0.37
USB1-202ENST00000423271 TPTEP56180 551 aa12.74□□□□□ -0.37
USB1-202ENST00000423271 HILS1P60008 231 aa12.74□□□□□ -0.37
USB1-202ENST00000423271 SNAI3Q3KNW1 292 aa12.74□□□□□ -0.37
USB1-202ENST00000423271 FAM201AQ5SY85 155 aa12.74□□□□□ -0.37
USB1-202ENST00000423271 DCXRQ7Z4W1 244 aa12.74□□□□□ -0.37
USB1-202ENST00000423271 NANPQ8TBE9 248 aa12.74□□□□□ -0.37
USB1-202ENST00000423271 C22orf15Q8WYQ4 148 aa12.74□□□□□ -0.37
USB1-202ENST00000423271 MBOAT4Q96T53 435 aa12.74□□□□□ -0.37
USB1-202ENST00000423271 PRRG3Q9BZD7 231 aa12.74□□□□□ -0.37
USB1-202ENST00000423271 DDX28Q9NUL7 540 aaKnown RBP12.74□□□□□ -0.37
USB1-202ENST00000423271 TMEM100Q9NV29 134 aa12.74□□□□□ -0.37
USB1-202ENST00000423271 NBEAL1Q6ZS30 2694 aa12.74□□□□□ -0.37
USB1-202ENST00000423271 PPIAL4EA0A075B759 164 aa12.73□□□□□ -0.37
USB1-202ENST00000423271 PPIAL4CA0A0B4J2A2 164 aa12.73□□□□□ -0.37
USB1-202ENST00000423271 A8MXK9 166 aa12.73□□□□□ -0.37
USB1-202ENST00000423271 PPIAL4DF5H284 164 aa12.73□□□□□ -0.37
USB1-202ENST00000423271 SPARCP09486 303 aa12.73□□□□□ -0.37
USB1-202ENST00000423271 PPIAL4FP0DN26 164 aa12.73□□□□□ -0.37
USB1-202ENST00000423271 ZNF12P17014 697 aa12.73□□□□□ -0.37
USB1-202ENST00000423271 SLC2A5P22732 501 aa12.73□□□□□ -0.37
USB1-202ENST00000423271 OTX1P32242 354 aaPredicted RBP12.73□□□□□ -0.37
USB1-202ENST00000423271 MALLQ13021 153 aa12.73□□□□□ -0.37
USB1-202ENST00000423271 KLHL12Q53G59 568 aa12.73□□□□□ -0.37
USB1-202ENST00000423271 LPCAT4Q643R3 524 aa12.73□□□□□ -0.37
USB1-202ENST00000423271 PGAP1Q75T13 922 aa12.73□□□□□ -0.37
USB1-202ENST00000423271 MUC20Q8N307 709 aaPredicted RBP12.73□□□□□ -0.37
USB1-202ENST00000423271 TCEANCQ8N8B7 351 aa12.73□□□□□ -0.37
USB1-202ENST00000423271 OR2AE1Q8NHA4 323 aa12.73□□□□□ -0.37
USB1-202ENST00000423271 SPTSSAQ969W0 71 aa12.73□□□□□ -0.37
USB1-202ENST00000423271 ZMYND19Q96E35 227 aaPredicted RBP12.73□□□□□ -0.37
USB1-202ENST00000423271 TOR3AQ9H497 397 aa12.73□□□□□ -0.37
USB1-202ENST00000423271 TMEM165Q9HC07 324 aa12.73□□□□□ -0.37
USB1-202ENST00000423271 POLR3KQ9Y2Y1 108 aaPredicted RBP12.73□□□□□ -0.37
USB1-202ENST00000423271 IFNL4K9M1U5 179 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 HAX1O00165 279 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 PRODHO43272 600 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 SLC2A1P11166 492 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 GSTT1P30711 240 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 ENTPD1P49961 510 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 PRKXP51817 358 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 BLVRAP53004 296 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 RPS7P62081 194 aaKnown RBP12.72□□□□□ -0.37
USB1-202ENST00000423271 EFNB1P98172 346 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 HOXA4Q00056 320 aaPredicted RBP12.72□□□□□ -0.37
USB1-202ENST00000423271 ZNF92Q03936 586 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 ZNF154Q13106 437 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 MAB21L1Q13394 359 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 APOFQ13790 326 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 LRRC36Q1X8D7 754 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 ESCO2Q56NI9 601 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 GLYATL3Q5SZD4 288 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 PRAMEF6Q5VXH4 476 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 USP43Q70EL4 1123 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 MRPL21Q7Z2W9 205 aaKnown RBP12.72□□□□□ -0.37
USB1-202ENST00000423271 BCDIN3DQ7Z5W3 292 aaKnown RBP12.72□□□□□ -0.37
USB1-202ENST00000423271 ERI1Q8IV48 349 aaKnown RBP12.72□□□□□ -0.37
USB1-202ENST00000423271 TMEM163Q8TC26 289 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 ZFAND2BQ8WV99 257 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 SPRYD4Q8WW59 207 aaPredicted RBP12.72□□□□□ -0.37
USB1-202ENST00000423271 IL4I1Q96RQ9 567 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 COPS4Q9BT78 406 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 ESM1Q9NQ30 184 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 INSIG2Q9Y5U4 225 aa12.72□□□□□ -0.37
USB1-202ENST00000423271 DOCK11Q5JSL3 2073 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 CCDC182A6NF36 153 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 CD300LBA8K4G0 201 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 E9PQ18 207 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 ZNF593O00488 134 aaPredicted RBP12.71□□□□□ -0.37
USB1-202ENST00000423271 SELENOFO60613 162 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 WNT2P09544 360 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 RPS2P15880 293 aaKnown RBP12.71□□□□□ -0.37
USB1-202ENST00000423271 CA6P23280 308 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 PEX2P28328 305 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 CD200P41217 278 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 GATA4P43694 442 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 PCK2Q16822 640 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 ZNF181Q2M3W8 571 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 SLC35D3Q5M8T2 416 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 SPATC1Q76KD6 591 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 KLBQ86Z14 1044 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 TIGD4Q8IY51 512 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 GALNT4Q8N4A0 578 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 BPIFB2Q8N4F0 458 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms