RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 TOR3AQ9H497 397 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 FN3KRPQ9HA64 309 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 RPRD1BQ9NQG5 326 aaKnown RBP10.59□□□□□ -0.71
LINC00339-203ENST00000420503 ENPP4Q9Y6X5 453 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 KMT2CQ8NEZ4 4911 aaKnown RBP10.58□□□□□ -0.72
LINC00339-203ENST00000420503 OR6C68A6NDL8 312 aa10.58□□□□□ -0.72
LINC00339-203ENST00000420503 UNC119BA6NIH7 251 aa10.58□□□□□ -0.72
LINC00339-203ENST00000420503 HIST1H1CP16403 213 aaKnown RBP10.58□□□□□ -0.72
LINC00339-203ENST00000420503 AMY2BP19961 511 aa10.58□□□□□ -0.72
LINC00339-203ENST00000420503 PYCR1P32322 319 aa10.58□□□□□ -0.72
LINC00339-203ENST00000420503 IFNA8P32881 189 aa10.58□□□□□ -0.72
LINC00339-203ENST00000420503 BPIFB3P59826 476 aa10.58□□□□□ -0.72
LINC00339-203ENST00000420503 CSNK2BP67870 215 aa10.58□□□□□ -0.72
LINC00339-203ENST00000420503 MRPL21Q7Z2W9 205 aaKnown RBP10.58□□□□□ -0.72
LINC00339-203ENST00000420503 ADCK1Q86TW2 530 aa10.58□□□□□ -0.72
LINC00339-203ENST00000420503 C11orf53Q8IXP5 236 aa10.58□□□□□ -0.72
LINC00339-203ENST00000420503 CELF2-AS1Q8N7Q2 184 aa10.58□□□□□ -0.72
LINC00339-203ENST00000420503 SDR9C7Q8NEX9 313 aa10.58□□□□□ -0.72
LINC00339-203ENST00000420503 LZICQ8WZA0 190 aa10.58□□□□□ -0.72
LINC00339-203ENST00000420503 CCL13Q99616 98 aa10.58□□□□□ -0.72
LINC00339-203ENST00000420503 ATF6BQ99941 703 aa10.58□□□□□ -0.72
LINC00339-203ENST00000420503 NDUFAF4Q9P032 175 aa10.58□□□□□ -0.72
LINC00339-203ENST00000420503 ONECUT1Q9UBC0 465 aa10.58□□□□□ -0.72
LINC00339-203ENST00000420503 N6AMT1Q9Y5N5 214 aa10.58□□□□□ -0.72
LINC00339-203ENST00000420503 hCG_1807616A0A1W2PRN6 198 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 MEGF11A6BM72 1044 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 TVP23AA6NH52 213 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 A6NLC8 198 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 BBIP1A8MTZ0 92 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 RNASEK-C17orf49H0YIS7 233 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.57□□□□□ -0.72
LINC00339-203ENST00000420503 M0R135 149 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 CCDC22O60826 627 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 PTBP3O95758 552 aaKnown RBP10.57□□□□□ -0.72
LINC00339-203ENST00000420503 FAM107AO95990 144 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 H1F0P07305 194 aaKnown RBP10.57□□□□□ -0.72
LINC00339-203ENST00000420503 GSK3BP49841 420 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 NPY4RP50391 375 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 SLC7A2P52569 658 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 CD276Q5ZPR3 534 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 DHRS7BQ6IAN0 325 aaPredicted RBP10.57□□□□□ -0.72
LINC00339-203ENST00000420503 DPY19L2P2Q6ZN68 376 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 LYG1Q8N1E2 194 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 OR56B2PQ8NGI1 322 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 PPP1R35Q8TAP8 253 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 ITPKCQ96DU7 683 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 ZNF799Q96GE5 643 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 FUZQ9BT04 418 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 C16orf95Q9H693 158 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 ZNRD1Q9P1U0 126 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 CYB5R1Q9UHQ9 305 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 RPUSD1Q9UJJ7 312 aaKnown RBP10.57□□□□□ -0.72
LINC00339-203ENST00000420503 FOXJ3Q9UPW0 622 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 TMEM5Q9Y2B1 443 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 CAPN7Q9Y6W3 813 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 V9GYQ6 96 aa10.57□□□□□ -0.72
LINC00339-203ENST00000420503 CSF1P09603 554 aa10.56□□□□□ -0.72
LINC00339-203ENST00000420503 GMFBP60983 142 aa10.56□□□□□ -0.72
LINC00339-203ENST00000420503 MAPRE2Q15555 327 aa10.56□□□□□ -0.72
LINC00339-203ENST00000420503 PCK2Q16822 640 aa10.56□□□□□ -0.72
LINC00339-203ENST00000420503 RFX4Q33E94 735 aa10.56□□□□□ -0.72
LINC00339-203ENST00000420503 WDR38Q5JTN6 314 aa10.56□□□□□ -0.72
LINC00339-203ENST00000420503 SMARCD3Q6STE5 483 aa10.56□□□□□ -0.72
LINC00339-203ENST00000420503 RRM2BQ7LG56 351 aa10.56□□□□□ -0.72
LINC00339-203ENST00000420503 Q8N7P7 452 aa10.56□□□□□ -0.72
LINC00339-203ENST00000420503 PNLDC1Q8NA58 520 aaKnown RBP10.56□□□□□ -0.72
LINC00339-203ENST00000420503 OR5T2Q8NGG2 359 aa10.56□□□□□ -0.72
LINC00339-203ENST00000420503 OR51L1Q8NGJ5 315 aa10.56□□□□□ -0.72
LINC00339-203ENST00000420503 RP9Q8TA86 221 aaKnown RBP10.56□□□□□ -0.72
LINC00339-203ENST00000420503 FANK1Q8TC84 345 aa10.56□□□□□ -0.72
LINC00339-203ENST00000420503 ERGIC1Q969X5 290 aa10.56□□□□□ -0.72
LINC00339-203ENST00000420503 PPA2Q9H2U2 334 aa10.56□□□□□ -0.72
LINC00339-203ENST00000420503 OR52D1Q9H346 318 aa10.56□□□□□ -0.72
LINC00339-203ENST00000420503 KIF17Q9P2E2 1029 aa10.56□□□□□ -0.72
LINC00339-203ENST00000420503 VPREB3Q9UKI3 123 aa10.56□□□□□ -0.72
LINC00339-203ENST00000420503 ARL2BPQ9Y2Y0 163 aa10.56□□□□□ -0.72
LINC00339-203ENST00000420503 TRAV38-1A0A0B4J264 116 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 A0A1W2PRQ8 180 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 GGT3PA6NGU5 568 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 ACOT8O14734 319 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 GSTA4O15217 222 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 NPPAP01160 153 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 LHBP01229 141 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 HLA-DQA2P01906 255 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 LIPFP07098 398 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 CRABP1P29762 137 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 RPS6KA3P51812 740 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 PRKXP51817 358 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 MALLQ13021 153 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 IKZF1Q13422 519 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 DGCR6Q14129 220 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 C2orf68Q2NKX9 166 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 CDONQ4KMG0 1287 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 SLC35F1Q5T1Q4 408 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 SAMD5Q5TGI4 173 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 SLC35E4Q6ICL7 350 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 C1orf122Q6ZSJ8 110 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 CYB561A3Q8NBI2 242 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 LY6G5BQ8NDX9 201 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 LRRC29Q8WV35 223 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms