RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 SLC35D3Q5M8T2 416 aa13.82□□□□□ -0.2
LINC00404-201ENST00000418660 TMEM236Q5W0B7 351 aa13.82□□□□□ -0.2
LINC00404-201ENST00000418660 FAHD1Q6P587 224 aa13.82□□□□□ -0.2
LINC00404-201ENST00000418660 ZNF454Q8N9F8 522 aa13.82□□□□□ -0.2
LINC00404-201ENST00000418660 OR11L1Q8NGX0 322 aa13.82□□□□□ -0.2
LINC00404-201ENST00000418660 OR5K1Q8NHB7 308 aa13.82□□□□□ -0.2
LINC00404-201ENST00000418660 Q8TCH9 128 aa13.82□□□□□ -0.2
LINC00404-201ENST00000418660 PLEKHA8Q96JA3 519 aa13.82□□□□□ -0.2
LINC00404-201ENST00000418660 AMELYQ99218 206 aa13.82□□□□□ -0.2
LINC00404-201ENST00000418660 ADAT1Q9BUB4 502 aaKnown RBP13.82□□□□□ -0.2
LINC00404-201ENST00000418660 C19orf24Q9BVV8 132 aa13.82□□□□□ -0.2
LINC00404-201ENST00000418660 PAPOLBQ9NRJ5 636 aaKnown RBP13.82□□□□□ -0.2
LINC00404-201ENST00000418660 OPN4Q9UHM6 478 aa13.82□□□□□ -0.2
LINC00404-201ENST00000418660 PPIAL4AQ9Y536 164 aa13.82□□□□□ -0.2
LINC00404-201ENST00000418660 A0A0A6YYJ9 748 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 TBX1O43435 398 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 ZNF205O95201 554 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 PTBP3O95758 552 aaKnown RBP13.81□□□□□ -0.2
LINC00404-201ENST00000418660 H2BFMP0C1H6 154 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 OPRL1P41146 370 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 DAPP51397 102 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 CRISP1P54107 249 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 SEC61A1P61619 476 aaKnown RBP13.81□□□□□ -0.2
LINC00404-201ENST00000418660 KLHL12Q53G59 568 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 ESCO2Q56NI9 601 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 PRAMEF6Q5VXH4 476 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 PRSS45Q7RTY3 260 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 KLBQ86Z14 1044 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 PARP8Q8N3A8 854 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 SPERTQ8NA61 448 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 PLPP7Q8NBV4 271 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 OR56B2PQ8NGI1 322 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 OTOSQ8NHW6 89 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 NANPQ8TBE9 248 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 SGK3Q96BR1 496 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 TMEM246Q9BRR3 403 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 KIF17Q9P2E2 1029 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 MIOXQ9UGB7 285 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 LRCH1Q9Y2L9 728 aa13.81□□□□□ -0.2
LINC00404-201ENST00000418660 TRAPPC2LH3BP13 241 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 SELENOFO60613 162 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 FAM20BO75063 409 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 LYNP07948 512 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 ADRA2CP18825 462 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 EPHA1P21709 976 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 SLC2A5P22732 501 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 CFL1P23528 166 aaKnown RBP13.8□□□□□ -0.2
LINC00404-201ENST00000418660 ZNF121P58317 390 aaPredicted RBP13.8□□□□□ -0.2
LINC00404-201ENST00000418660 FAM3AP98173 230 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 MPPED2Q15777 294 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 ATP6AP1Q15904 470 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 SNAPC1Q16533 368 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 TIGD6Q17RP2 521 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 ZNF404Q494X3 552 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 FAM57BQ71RH2 274 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 SLC16A9Q7RTY1 509 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.8□□□□□ -0.2
LINC00404-201ENST00000418660 OR52H1Q8NGJ2 320 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 THEM6Q8WUY1 208 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 REEP6Q96HR9 211 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 FN3KRPQ9HA64 309 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 MMP26Q9NRE1 261 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 UFSP2Q9NUQ7 469 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 TVP23BQ9NYZ1 205 aa13.8□□□□□ -0.2
LINC00404-201ENST00000418660 DNHD1Q96M86 4753 aa13.79□□□□□ -0.2
LINC00404-201ENST00000418660 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.79□□□□□ -0.2
LINC00404-201ENST00000418660 RPS2P15880 293 aaKnown RBP13.79□□□□□ -0.2
LINC00404-201ENST00000418660 ZNF12P17014 697 aa13.79□□□□□ -0.2
LINC00404-201ENST00000418660 RPS7P62081 194 aaKnown RBP13.79□□□□□ -0.2
LINC00404-201ENST00000418660 ESRRGP62508 458 aa13.79□□□□□ -0.2
LINC00404-201ENST00000418660 MZT1Q08AG7 82 aa13.79□□□□□ -0.2
LINC00404-201ENST00000418660 FAM201AQ5SY85 155 aa13.79□□□□□ -0.2
LINC00404-201ENST00000418660 DEFB108BQ8NET1 73 aa13.79□□□□□ -0.2
LINC00404-201ENST00000418660 BBS1Q8NFJ9 593 aa13.79□□□□□ -0.2
LINC00404-201ENST00000418660 ZNF418Q8TF45 676 aaPredicted RBP13.79□□□□□ -0.2
LINC00404-201ENST00000418660 NEIL1Q96FI4 390 aaPredicted RBP13.79□□□□□ -0.2
LINC00404-201ENST00000418660 DUS3LQ96G46 650 aaKnown RBP13.79□□□□□ -0.2
LINC00404-201ENST00000418660 SSBP3Q9BWW4 388 aaPredicted RBP13.79□□□□□ -0.2
LINC00404-201ENST00000418660 OR10A2Q9H208 303 aa13.79□□□□□ -0.2
LINC00404-201ENST00000418660 DNAJC27Q9NZQ0 273 aa13.79□□□□□ -0.2
LINC00404-201ENST00000418660 RNF7Q9UBF6 113 aa13.79□□□□□ -0.2
LINC00404-201ENST00000418660 AP4S1Q9Y587 144 aa13.79□□□□□ -0.2
LINC00404-201ENST00000418660 INSIG2Q9Y5U4 225 aa13.79□□□□□ -0.2
LINC00404-201ENST00000418660 ANKRD30BLA7E2S9 258 aa13.78□□□□□ -0.2
LINC00404-201ENST00000418660 G3V2T6 193 aa13.78□□□□□ -0.2
LINC00404-201ENST00000418660 VENTXO95231 258 aa13.78□□□□□ -0.2
LINC00404-201ENST00000418660 FSHBP01225 129 aa13.78□□□□□ -0.2
LINC00404-201ENST00000418660 FASP25445 335 aa13.78□□□□□ -0.2
LINC00404-201ENST00000418660 NAA10P41227 235 aaPredicted RBP13.78□□□□□ -0.2
LINC00404-201ENST00000418660 ZNF154Q13106 437 aa13.78□□□□□ -0.2
LINC00404-201ENST00000418660 APOFQ13790 326 aa13.78□□□□□ -0.2
LINC00404-201ENST00000418660 PTGES3Q15185 160 aaKnown RBP13.78□□□□□ -0.2
LINC00404-201ENST00000418660 C1orf146Q5VVC0 180 aa13.78□□□□□ -0.2
LINC00404-201ENST00000418660 DCDC5Q6ZRR9 648 aa13.78□□□□□ -0.2
LINC00404-201ENST00000418660 DVL3Q92997 716 aaPredicted RBP13.78□□□□□ -0.2
LINC00404-201ENST00000418660 PGAM5Q96HS1 289 aa13.78□□□□□ -0.2
LINC00404-201ENST00000418660 TEAD3Q99594 435 aa13.78□□□□□ -0.2
LINC00404-201ENST00000418660 RGCCQ9H4X1 137 aa13.78□□□□□ -0.2
LINC00404-201ENST00000418660 NIPAL2Q9H841 368 aa13.78□□□□□ -0.2
LINC00404-201ENST00000418660 BRD7Q9NPI1 651 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms