RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 TNFAIP6P98066 277 aaPredicted RBP10.6□□□□□ -0.71
SKA1-203ENST00000417656 HNRNPA0Q13151 305 aaKnown RBP10.6□□□□□ -0.71
SKA1-203ENST00000417656 CDK5R2Q13319 367 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 IL18R1Q13478 541 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 FAM209AQ5JX71 171 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 ZNF786Q8N393 782 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 MAPK1IP1LQ8NDC0 245 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 SPRYD4Q8WW59 207 aaPredicted RBP10.6□□□□□ -0.71
SKA1-203ENST00000417656 SGK3Q96BR1 496 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 SLC30A2Q9BRI3 323 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 PIMREGQ9BSJ6 248 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 REPIN1Q9BWE0 567 aaKnown RBP10.6□□□□□ -0.71
SKA1-203ENST00000417656 OPA3Q9H6K4 179 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 DECR2Q9NUI1 292 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 ZDHHC8Q9ULC8 765 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 GTF2A1LQ9UNN4 478 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 MAP1AP78559 2803 aaPredicted RBP10.6□□□□□ -0.71
SKA1-203ENST00000417656 LOC390937A0A1W2PQ73 354 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 LOC110117498-PIK3R3F6TDL0 507 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 H0YAE9 185 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 H0YL77 283 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 J3QRE1 110 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 MLNRO43193 412 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 RP2O75695 350 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 RPP14O95059 124 aaKnown RBP10.59□□□□□ -0.71
SKA1-203ENST00000417656 PNPP00491 289 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 CD55P08174 381 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 SLC25A16P16260 332 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 ACHEP22303 614 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 COL8A2P25067 703 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 DCTDP32321 178 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 FAM3AP98173 230 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 RIPK1Q13546 671 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 TP53I3Q53FA7 332 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 C6orf52Q5T4I8 152 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 ZNF684Q5T5D7 378 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 C8orf59Q8N0T1 100 aaPredicted RBP10.59□□□□□ -0.71
SKA1-203ENST00000417656 YIPF7Q8N8F6 280 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 ITLN1Q8WWA0 313 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 RDH5Q92781 318 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 DVL3Q92997 716 aaPredicted RBP10.59□□□□□ -0.71
SKA1-203ENST00000417656 C18orf12Q96KH6 178 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 LYZL4Q96KX0 146 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 DIRC2Q96SL1 478 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 SOX7Q9BT81 388 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 ADAT1Q9BUB4 502 aaKnown RBP10.59□□□□□ -0.71
SKA1-203ENST00000417656 REG4Q9BYZ8 158 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 BPESC1Q9GZL8 116 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 PBOV1Q9GZY1 135 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 RGCCQ9H4X1 137 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 ZNF275Q9NSD4 429 aaPredicted RBP10.59□□□□□ -0.71
SKA1-203ENST00000417656 ACOXLQ9NUZ1 547 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 EXOGQ9Y2C4 368 aaKnown RBP10.59□□□□□ -0.71
SKA1-203ENST00000417656 RRP15Q9Y3B9 282 aaKnown RBP10.59□□□□□ -0.71
SKA1-203ENST00000417656 CACNG2Q9Y698 323 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 R4GMQ9 66 aa10.59□□□□□ -0.71
SKA1-203ENST00000417656 A0A096LNT2 108 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 IGHV1-69-2A0A0G2JMI3 117 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 DAPL1A0PJW8 107 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 METTL15A6NJ78 407 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 VWC2LB2RUY7 222 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 F5H5P2 479 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 NDUFS8O00217 210 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 HLA-DPB1P04440 258 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 CA6P23280 308 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 TNFSF4P23510 183 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 CFL1P23528 166 aaKnown RBP10.58□□□□□ -0.72
SKA1-203ENST00000417656 NR4A2P43354 598 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 ISL1P61371 349 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 MRPS11P82912 194 aaKnown RBP10.58□□□□□ -0.72
SKA1-203ENST00000417656 BCL2L15Q5TBC7 163 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 LIPNQ5VXI9 398 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 IZUMO2Q6UXV1 221 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 FAM220AQ7Z4H9 259 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 COMMD2Q86X83 199 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 OR52I1Q8NGK6 324 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 OR13G1Q8NGZ3 307 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 TFAP2CQ92754 450 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 PPP1R14AQ96A00 147 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 OR2V2Q96R30 315 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 EGLN1Q9GZT9 426 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 VCX3BQ9H321 246 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 MOB1AQ9H8S9 216 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 CHODLQ9H9P2 273 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 TMEM100Q9NV29 134 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 TREM2Q9NZC2 230 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 NUFIP1Q9UHK0 495 aaKnown RBP10.58□□□□□ -0.72
SKA1-203ENST00000417656 GNG8Q9UK08 70 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 MYRFQ9Y2G1 1151 aa10.58□□□□□ -0.72
SKA1-203ENST00000417656 RPL36Q9Y3U8 105 aaKnown RBP10.58□□□□□ -0.72
SKA1-203ENST00000417656 VPS13CQ709C8 3753 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 MED13LQ71F56 2210 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 IGHV3-64DA0A0J9YX35 117 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 A0A1B0GWJ7 208 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 LCE2BO14633 110 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 SULT1C4O75897 302 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 FADS2O95864 444 aaKnown RBP10.57□□□□□ -0.72
SKA1-203ENST00000417656 IGHA1P01876 353 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 TTRP02766 147 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 INHBBP09529 407 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms