RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 C17orf107Q6ZR85 190 aa12.27□□□□□ -0.45
RPS28-201ENST00000417088 ZNF826PQ6ZT77 177 aa12.27□□□□□ -0.45
RPS28-201ENST00000417088 GCSAMQ8N6F7 178 aa12.27□□□□□ -0.45
RPS28-201ENST00000417088 CYB561A3Q8NBI2 242 aa12.27□□□□□ -0.45
RPS28-201ENST00000417088 GATAD2BQ8WXI9 593 aa12.27□□□□□ -0.45
RPS28-201ENST00000417088 NSRP1Q9H0G5 558 aaKnown RBP12.27□□□□□ -0.45
RPS28-201ENST00000417088 SIRPDQ9H106 197 aa12.27□□□□□ -0.45
RPS28-201ENST00000417088 MRPL15Q9P015 296 aaKnown RBP12.27□□□□□ -0.45
RPS28-201ENST00000417088 KIF17Q9P2E2 1029 aa12.27□□□□□ -0.45
RPS28-201ENST00000417088 TRAV38-1A0A0B4J264 116 aa12.26□□□□□ -0.45
RPS28-201ENST00000417088 CLPSL1A2RUU4 121 aa12.26□□□□□ -0.45
RPS28-201ENST00000417088 OOEPA6NGQ2 149 aa12.26□□□□□ -0.45
RPS28-201ENST00000417088 GYPAP02724 150 aa12.26□□□□□ -0.45
RPS28-201ENST00000417088 FABP3P05413 133 aa12.26□□□□□ -0.45
RPS28-201ENST00000417088 GRPP07492 148 aa12.26□□□□□ -0.45
RPS28-201ENST00000417088 MSX2P35548 267 aaPredicted RBP12.26□□□□□ -0.45
RPS28-201ENST00000417088 MIDNQ504T8 468 aa12.26□□□□□ -0.45
RPS28-201ENST00000417088 PGBD2Q6P3X8 592 aa12.26□□□□□ -0.45
RPS28-201ENST00000417088 DRAM2Q6UX65 266 aa12.26□□□□□ -0.45
RPS28-201ENST00000417088 FAM90A1Q86YD7 464 aa12.26□□□□□ -0.45
RPS28-201ENST00000417088 PNLDC1Q8NA58 520 aaKnown RBP12.26□□□□□ -0.45
RPS28-201ENST00000417088 SPERTQ8NA61 448 aa12.26□□□□□ -0.45
RPS28-201ENST00000417088 PROKR2Q8NFJ6 384 aa12.26□□□□□ -0.45
RPS28-201ENST00000417088 SSMEM1Q8WWF3 244 aa12.26□□□□□ -0.45
RPS28-201ENST00000417088 MCUR1Q96AQ8 359 aa12.26□□□□□ -0.45
RPS28-201ENST00000417088 CITED1Q99966 193 aa12.26□□□□□ -0.45
RPS28-201ENST00000417088 ELAC2Q9BQ52 826 aaKnown RBP12.26□□□□□ -0.45
RPS28-201ENST00000417088 EGLN3Q9H6Z9 239 aa12.26□□□□□ -0.45
RPS28-201ENST00000417088 TRIM36Q9NQ86 728 aa12.26□□□□□ -0.45
RPS28-201ENST00000417088 ACOXLQ9NUZ1 547 aa12.26□□□□□ -0.45
RPS28-201ENST00000417088 MAGEL2Q9UJ55 1249 aa12.26□□□□□ -0.45
RPS28-201ENST00000417088 POMT1Q9Y6A1 747 aa12.26□□□□□ -0.45
RPS28-201ENST00000417088 IGHV1-69DA0A0B4J2H0 117 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 BHLHE40O14503 412 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 DVL1O14640 695 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 LHBP01229 141 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 IGHV1-69P01742 117 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 SLC2A1P11166 492 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 HSD17B1P14061 328 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 PRKXP51817 358 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 KRTAP10-3P60369 221 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 ARF6P62330 175 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 POU4F2Q12837 409 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 PDCD1Q15116 288 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 METTL11BQ5VVY1 283 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 BTN2A1Q7KYR7 527 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 DCXRQ7Z4W1 244 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 OR56B2PQ8NGI1 322 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 OR51L1Q8NGJ5 315 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 OR2T4Q8NH00 348 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 LHX4Q969G2 390 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 NSMCE2Q96MF7 247 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 COPS4Q9BT78 406 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 TRIM15Q9C019 465 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 IL1RAPQ9NPH3 570 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 CD300AQ9UGN4 299 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 CDH10Q9Y6N8 788 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 COMMD3-BMI1R4GMX3 469 aa12.25□□□□□ -0.45
RPS28-201ENST00000417088 A6NLC8 198 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 ARPC2O15144 300 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 HMGA2P52926 109 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 PCK2Q16822 640 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 TEX36Q5VZQ5 186 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 BRICD5Q6PL45 260 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 RHOUQ7L0Q8 258 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 ZDHHC21Q8IVQ6 265 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 LNX2Q8N448 690 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 SLC37A3Q8NCC5 494 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 OR9Q2Q8NGE9 314 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 OR52L1Q8NGH7 329 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 OR4C15Q8NGM1 316 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 OR8D4Q8NGM9 314 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 OR9Q1Q8NGQ5 310 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 TBC1D15Q8TC07 691 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 SLAMF6Q96DU3 332 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 KCNJ15Q99712 375 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 CENPMQ9NSP4 180 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 C14orf119Q9NWQ9 140 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 IL20Q9NYY1 176 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 KAAG1Q9UBP8 84 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 N6AMT1Q9Y5N5 214 aa12.24□□□□□ -0.45
RPS28-201ENST00000417088 IGHV3OR15-7A0A075B7D8 119 aa12.23□□□□□ -0.45
RPS28-201ENST00000417088 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.23□□□□□ -0.45
RPS28-201ENST00000417088 A0A0U1RQK1 487 aa12.23□□□□□ -0.45
RPS28-201ENST00000417088 hCG_1807616A0A1W2PRN6 198 aa12.23□□□□□ -0.45
RPS28-201ENST00000417088 GPR137BO60478 399 aa12.23□□□□□ -0.45
RPS28-201ENST00000417088 ECDO95905 644 aaPredicted RBP12.23□□□□□ -0.45
RPS28-201ENST00000417088 IGHV4-59P01825 116 aa12.23□□□□□ -0.45
RPS28-201ENST00000417088 SPARCP09486 303 aa12.23□□□□□ -0.45
RPS28-201ENST00000417088 ENTPD1P49961 510 aa12.23□□□□□ -0.45
RPS28-201ENST00000417088 RPL15P61313 204 aaKnown RBP12.23□□□□□ -0.45
RPS28-201ENST00000417088 MZT1Q08AG7 82 aa12.23□□□□□ -0.45
RPS28-201ENST00000417088 C11orf91Q3C1V1 193 aa12.23□□□□□ -0.45
RPS28-201ENST00000417088 HSP90B2PQ58FF3 399 aa12.23□□□□□ -0.45
RPS28-201ENST00000417088 RPL13AP3Q6NVV1 102 aa12.23□□□□□ -0.45
RPS28-201ENST00000417088 WDR86Q86TI4 376 aa12.23□□□□□ -0.45
RPS28-201ENST00000417088 LDLRAD3Q86YD5 345 aa12.23□□□□□ -0.45
RPS28-201ENST00000417088 C11orf53Q8IXP5 236 aa12.23□□□□□ -0.45
RPS28-201ENST00000417088 FGFRL1Q8N441 504 aa12.23□□□□□ -0.45
RPS28-201ENST00000417088 ZNF511Q8NB15 262 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms