RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 ZNF826PQ6ZT77 177 aa12.59□□□□□ -0.39
UBXN4-203ENST00000416538 OR6N2Q8NGY6 317 aa12.59□□□□□ -0.39
UBXN4-203ENST00000416538 CANT1Q8WVQ1 401 aa12.59□□□□□ -0.39
UBXN4-203ENST00000416538 SPRYD4Q8WW59 207 aaPredicted RBP12.59□□□□□ -0.39
UBXN4-203ENST00000416538 NEIL1Q96FI4 390 aaPredicted RBP12.59□□□□□ -0.39
UBXN4-203ENST00000416538 KCNJ15Q99712 375 aa12.59□□□□□ -0.39
UBXN4-203ENST00000416538 CHID1Q9BWS9 393 aa12.59□□□□□ -0.39
UBXN4-203ENST00000416538 CENPMQ9NSP4 180 aa12.59□□□□□ -0.39
UBXN4-203ENST00000416538 ZNF319Q9P2F9 582 aa12.59□□□□□ -0.39
UBXN4-203ENST00000416538 NUP50Q9UKX7 468 aa12.59□□□□□ -0.39
UBXN4-203ENST00000416538 TRAV40A0A0B4J280 105 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 ARRDC5A6NEK1 342 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 DNAJC9-AS1A6NH13 148 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 TRIM77I1YAP6 450 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 ZNF3P17036 446 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 EGR1P18146 543 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 GRK5P34947 590 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 PSMB10P40306 273 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 PITPNBP48739 271 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 GNB2P62879 340 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 EIF2B1Q14232 305 aaKnown RBP12.58□□□□□ -0.4
UBXN4-203ENST00000416538 WDR25Q64LD2 544 aaPredicted RBP12.58□□□□□ -0.4
UBXN4-203ENST00000416538 DOK3Q7L591 496 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 DPY19L4Q7Z388 723 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 TIGD4Q8IY51 512 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 TEX47Q8TBZ9 253 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 GIPC3Q8TF64 312 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 SPSB4Q96A44 273 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 THTPAQ9BU02 230 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 ABHD6Q9BV23 337 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 MARCH7Q9H992 704 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 SMURF1Q9HCE7 757 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 MIOXQ9UGB7 285 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 KLHDC2Q9Y2U9 406 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 N6AMT1Q9Y5N5 214 aa12.58□□□□□ -0.4
UBXN4-203ENST00000416538 hCG_38984A0A1B0GV85 526 aa12.57□□□□□ -0.4
UBXN4-203ENST00000416538 MDFIC2A0A1B0GVS7 189 aa12.57□□□□□ -0.4
UBXN4-203ENST00000416538 GGT3PA6NGU5 568 aa12.57□□□□□ -0.4
UBXN4-203ENST00000416538 LRRC30A6NM36 301 aa12.57□□□□□ -0.4
UBXN4-203ENST00000416538 RIIAD1A6NNX1 92 aa12.57□□□□□ -0.4
UBXN4-203ENST00000416538 SELENOFO60613 162 aa12.57□□□□□ -0.4
UBXN4-203ENST00000416538 PLATP00750 562 aa12.57□□□□□ -0.4
UBXN4-203ENST00000416538 CST1P01037 141 aa12.57□□□□□ -0.4
UBXN4-203ENST00000416538 CX3CR1P49238 355 aa12.57□□□□□ -0.4
UBXN4-203ENST00000416538 ELF3P78545 371 aaPredicted RBP12.57□□□□□ -0.4
UBXN4-203ENST00000416538 SFRP4Q6FHJ7 346 aaPredicted RBP12.57□□□□□ -0.4
UBXN4-203ENST00000416538 DCDC5Q6ZRR9 648 aa12.57□□□□□ -0.4
UBXN4-203ENST00000416538 SLC16A9Q7RTY1 509 aa12.57□□□□□ -0.4
UBXN4-203ENST00000416538 ERI1Q8IV48 349 aaKnown RBP12.57□□□□□ -0.4
UBXN4-203ENST00000416538 C1orf87Q8N0U7 546 aa12.57□□□□□ -0.4
UBXN4-203ENST00000416538 PARP8Q8N3A8 854 aa12.57□□□□□ -0.4
UBXN4-203ENST00000416538 OR8B3Q8NGG8 313 aa12.57□□□□□ -0.4
UBXN4-203ENST00000416538 RNF133Q8WVZ7 376 aa12.57□□□□□ -0.4
UBXN4-203ENST00000416538 TAF15Q92804 592 aaKnown RBP eCLIP12.57□□□□□ -0.4
UBXN4-203ENST00000416538 UPRTQ96BW1 309 aa12.57□□□□□ -0.4
UBXN4-203ENST00000416538 ZMYND19Q96E35 227 aaPredicted RBP12.57□□□□□ -0.4
UBXN4-203ENST00000416538 OR8B2Q96RD0 313 aa12.57□□□□□ -0.4
UBXN4-203ENST00000416538 INTS14Q96SY0 518 aa12.57□□□□□ -0.4
UBXN4-203ENST00000416538 MRI1Q9BV20 369 aa12.57□□□□□ -0.4
UBXN4-203ENST00000416538 C1orf21Q9H246 121 aa12.57□□□□□ -0.4
UBXN4-203ENST00000416538 DNAJC27Q9NZQ0 273 aa12.57□□□□□ -0.4
UBXN4-203ENST00000416538 MRPL15Q9P015 296 aaKnown RBP12.57□□□□□ -0.4
UBXN4-203ENST00000416538 H3BN98 237 aa12.56□□□□□ -0.4
UBXN4-203ENST00000416538 TNFRSF13BO14836 293 aaPredicted RBP12.56□□□□□ -0.4
UBXN4-203ENST00000416538 IFNGP01579 166 aa12.56□□□□□ -0.4
UBXN4-203ENST00000416538 OPRL1P41146 370 aa12.56□□□□□ -0.4
UBXN4-203ENST00000416538 ZNF121P58317 390 aaPredicted RBP12.56□□□□□ -0.4
UBXN4-203ENST00000416538 FAM3AP98173 230 aa12.56□□□□□ -0.4
UBXN4-203ENST00000416538 AWAT1Q58HT5 328 aa12.56□□□□□ -0.4
UBXN4-203ENST00000416538 C11orf53Q8IXP5 236 aa12.56□□□□□ -0.4
UBXN4-203ENST00000416538 FGFRL1Q8N441 504 aa12.56□□□□□ -0.4
UBXN4-203ENST00000416538 GCSAMQ8N6F7 178 aa12.56□□□□□ -0.4
UBXN4-203ENST00000416538 BOLLQ8N9W6 283 aaKnown RBP12.56□□□□□ -0.4
UBXN4-203ENST00000416538 BBS1Q8NFJ9 593 aa12.56□□□□□ -0.4
UBXN4-203ENST00000416538 RAB40AQ8WXH6 277 aa12.56□□□□□ -0.4
UBXN4-203ENST00000416538 ERGIC1Q969X5 290 aa12.56□□□□□ -0.4
UBXN4-203ENST00000416538 SLC7A6OSQ96CW6 309 aaPredicted RBP12.56□□□□□ -0.4
UBXN4-203ENST00000416538 LRGUKQ96M69 825 aa12.56□□□□□ -0.4
UBXN4-203ENST00000416538 JMJD8Q96S16 334 aa12.56□□□□□ -0.4
UBXN4-203ENST00000416538 PDP1Q9P0J1 537 aaPredicted RBP12.56□□□□□ -0.4
UBXN4-203ENST00000416538 RNF7Q9UBF6 113 aa12.56□□□□□ -0.4
UBXN4-203ENST00000416538 KIR2DS1A0A191URI9 304 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 A0A1B0GW55 424 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 AQP12BA6NM10 295 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.55□□□□□ -0.4
UBXN4-203ENST00000416538 LGALS8O00214 317 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 PHYHO14832 338 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 TBX1O43435 398 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 XRCC2O43543 280 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 GLCEO94923 617 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 ANXA2P07355 339 aaKnown RBP12.55□□□□□ -0.4
UBXN4-203ENST00000416538 DUX4L2P0CJ85 424 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 DUX4L3P0CJ86 424 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 DUX4L4P0CJ87 422 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 DUX4L5P0CJ88 424 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 DUX4L6P0CJ89 424 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 DUX4L7P0CJ90 424 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 IRF2P14316 349 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 PRKACGP22612 351 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 FPR2P25090 351 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms