RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 REEP4Q9H6H4 257 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 NIPAL2Q9H841 368 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 ELF5Q9UKW6 265 aaPredicted RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 SCML2Q9UQR0 700 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 HEY1Q9Y5J3 304 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 CPAMD8Q8IZJ3 1885 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 IFITM10A6NMD0 228 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 FAM166BA8MTA8 275 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 A8MXK9 166 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 ZNF487B1APH4 448 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 TFECO14948 347 aaPredicted RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 ERI3O43414 337 aaKnown RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 TNFSF12O43508 249 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 SEMA4FO95754 770 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 AP2A1O95782 977 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 KLK3P07288 261 aaPredicted RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 ZSCAN5DPP0CG00 497 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 PRSS56P0CW18 603 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 NPR2P20594 1047 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 ARPP19P56211 112 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 RPS15AP62244 130 aaKnown RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 PHEXP78562 749 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 ZNF154Q13106 437 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 IGFBP7Q16270 282 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 KLHL38Q2WGJ6 581 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 FAM53AQ6NSI3 398 aaPredicted RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 CDKL3Q8IVW4 592 aaPredicted RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 GVQW1Q8N7I0 195 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 ZNF557Q8N988 423 aaPredicted RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 FBXO36Q8NEA4 188 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 NUP37Q8NFH4 326 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 ADAMTS16Q8TE57 1224 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 ALKBH3Q96Q83 286 aaPredicted RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 XPO6Q96QU8 1125 aaKnown RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 TMEM59Q9BXS4 323 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 TOLLIPQ9H0E2 274 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 DDIT4Q9NX09 232 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 GNPTGQ9UJJ9 305 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 NUP50Q9UKX7 468 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 MRPS18CQ9Y3D5 142 aaKnown RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 TEX15Q9BXT5 2789 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 HCFC1P51610 2035 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 DSPP15924 2871 aaKnown RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 TEP1Q99973 2627 aaKnown RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 A0A1W2PNV4 684 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 SMIM23A6NLE4 172 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 PMS2P5A8MQ11 134 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 NPIPA7E9PJI5 369 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 TMEM50AO95807 157 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 CD160O95971 181 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 OR4Q2P0C623 313 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 NPIPA8P0DM63 369 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 T-ENOLP0DO92 83 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 ZNF26P17031 533 aaPredicted RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 GGT1P19440 569 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 IVDP26440 423 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 CD38P28907 300 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 TPI1P60174 286 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 KRTAP10-2P60368 255 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 BASP1P80723 227 aaKnown RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 CDC20Q12834 499 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 UAP1Q16222 522 aaPredicted RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 SAMD4BQ5PRF9 694 aaKnown RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 KCTD16Q68DU8 428 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 ANKRD37Q7Z713 158 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 NUDCD3Q8IVD9 361 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 NRMQ8IXM6 262 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 FAM58AQ8N1B3 248 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 SLC22A18ASQ8N1D0 253 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 SYS1Q8N2H4 156 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 KIF2BQ8N4N8 673 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 OR6T1Q8NGN1 323 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 NTN5Q8WTR8 489 aaPredicted RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 NABP1Q96AH0 204 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 RNF170Q96K19 258 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 PGLYRP2Q96PD5 576 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 CSPG4P5Q96PW8 444 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 MCCC1Q96RQ3 725 aaPredicted RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 FAM173AQ9BQD7 235 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 TMEM204Q9BSN7 226 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 RSG1Q9BU20 258 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 UCK2Q9BZX2 261 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 NECAP2Q9NVZ3 263 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 DEC1Q9P2X7 70 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 KCNG2Q9UJ96 466 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 ANKRD36A6QL64 1941 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 MYO18AQ92614 2054 aaKnown RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 ACACAQ13085 2346 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 TRPC5OSA6NMA1 111 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 HACD1B0YJ81 288 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 H0YHG0 523 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 GOLGA8MH3BSY2 632 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 HSD17B6O14756 317 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 UGT1A9O60656 530 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 SCRG1O75711 98 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 TTC4O95801 387 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 TOMM40O96008 361 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 GIPP09681 153 aaPredicted RBP2.07□□□□□ -2.08
MCF2-204ENST00000414978 IGFBP5P24593 272 aa2.07□□□□□ -2.08
MCF2-204ENST00000414978 RPL22P35268 128 aaKnown RBP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms