RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 SPNS2Q8IVW8 549 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 OR14K1Q8NGZ2 314 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 ZNF721Q8TF20 911 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 BTF3L4Q96K17 158 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 ARPC5LQ9BPX5 153 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 CYSLTR2Q9NS75 346 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 MPC1Q9Y5U8 109 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 ST8SIA5O15466 376 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 CST2P09228 141 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 MDH2P40926 338 aaKnown RBP10.71□□□□□ -0.69
PTPRF-205ENST00000414879 GZMMP51124 257 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 OR13G1Q8NGZ3 307 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 SMIM4Q8WVI0 70 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 ASB10Q8WXI3 467 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 METTL17Q9H7H0 456 aaPredicted RBP10.71□□□□□ -0.69
PTPRF-205ENST00000414879 ADGRL4Q9HBW9 690 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 DLL4Q9NR61 685 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 LIN7CQ9NUP9 197 aaKnown RBP10.71□□□□□ -0.69
PTPRF-205ENST00000414879 PLA2G3Q9NZ20 509 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 BOLA2-SMG1P6H3BVE0 249 aa10.71□□□□□ -0.7
PTPRF-205ENST00000414879 SP9P0CG40 484 aa10.71□□□□□ -0.7
PTPRF-205ENST00000414879 ADRA2CP18825 462 aa10.71□□□□□ -0.7
PTPRF-205ENST00000414879 EPHA2P29317 976 aa10.71□□□□□ -0.7
PTPRF-205ENST00000414879 GSK3AP49840 483 aa10.71□□□□□ -0.7
PTPRF-205ENST00000414879 STPG1Q5TH74 334 aa10.71□□□□□ -0.7
PTPRF-205ENST00000414879 SLC51BQ86UW2 128 aa10.71□□□□□ -0.7
PTPRF-205ENST00000414879 WFDC8Q8IUA0 241 aa10.71□□□□□ -0.7
PTPRF-205ENST00000414879 TMEM229BQ8NBD8 167 aa10.71□□□□□ -0.7
PTPRF-205ENST00000414879 LIN37Q96GY3 246 aaPredicted RBP10.71□□□□□ -0.7
PTPRF-205ENST00000414879 ALKBH3Q96Q83 286 aaPredicted RBP10.71□□□□□ -0.7
PTPRF-205ENST00000414879 A0A096LPE4 126 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 A0A1W2PPZ6 126 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 PHF1O43189 567 aaPredicted RBP10.7□□□□□ -0.7
PTPRF-205ENST00000414879 LIPCP11150 499 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 HTR2BP41595 481 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 HMGN3Q15651 99 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 TMEM108Q6UXF1 575 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 OR1J1Q8NGS3 322 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 ZG16BQ96DA0 208 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 NTMQ9P121 344 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 IGHV3-15A0A0B4J1V0 119 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 PRICKLE3O43900 615 aaPredicted RBP10.7□□□□□ -0.7
PTPRF-205ENST00000414879 SMIM10L1P0DMW3 83 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 MGMTP16455 207 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 KITLGP21583 273 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 OPRM1P35372 400 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 HCCSP53701 268 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 ZNF85Q03923 595 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 TLE4Q04727 773 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 OR52I2Q8NH67 350 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 H1FXQ92522 213 aaKnown RBP10.7□□□□□ -0.7
PTPRF-205ENST00000414879 CORO2AQ92828 525 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 SMIM10Q96HG1 83 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 OR6C68A6NDL8 312 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 FUT3P21217 361 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 DUSP1P28562 367 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 MESP2Q0VG99 397 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 IAH1Q2TAA2 248 aaPredicted RBP10.7□□□□□ -0.7
PTPRF-205ENST00000414879 ZNF528Q3MIS6 628 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 RBMS3Q6XE24 437 aaKnown RBP10.7□□□□□ -0.7
PTPRF-205ENST00000414879 GPX8Q8TED1 209 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 BORCS7Q96B45 105 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 PELI1Q96FA3 418 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 HRASLSQ9HDD0 168 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 KCNJ16Q9NPI9 418 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 ABCD4O14678 606 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 PMP2P02689 132 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 LIFP15018 202 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 ALOX5APP20292 161 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 ANKRD34AQ69YU3 496 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 CMTM4Q8IZR5 234 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 OR2M3Q8NG83 312 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 OR4D6Q8NGJ1 314 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 BANF2Q9H503 90 aa10.7□□□□□ -0.7
PTPRF-205ENST00000414879 ST8SIA3O43173 380 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 LIMS3P0CW19 117 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 LIMS4P0CW20 117 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 TUBG1P23258 451 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 CBLN3Q6UW01 205 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 NHLRC1Q6VVB1 395 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 TMEM185AQ8NFB2 350 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 OR2I1PQ8NGU4 316 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 HAS2Q92819 552 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 TUBG2Q9NRH3 451 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 FBXO34Q9NWN3 711 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 PRKNO60260 465 aaPredicted RBP10.69□□□□□ -0.7
PTPRF-205ENST00000414879 LRP3O75074 770 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 SPDEFO95238 335 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 CD1AP06126 327 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 KCNJ3P48549 501 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 DUSP2Q05923 314 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 BRICD5Q6PL45 260 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 BHLHE23Q8NDY6 225 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 ISG20L2Q9H9L3 353 aaKnown RBP10.69□□□□□ -0.7
PTPRF-205ENST00000414879 MRPS18AQ9NVS2 196 aaKnown RBP10.69□□□□□ -0.7
PTPRF-205ENST00000414879 A0A1B0GUH1 482 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 NUDT19A8MXV4 375 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 NDUFB7P17568 137 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 HOXA1P49639 335 aaPredicted RBP10.69□□□□□ -0.7
PTPRF-205ENST00000414879 RAG2P55895 527 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms