RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 LCN2P80188 198 aa9.44□□□□□ -0.9
RFFL-204ENST00000414419 FAM57BQ71RH2 274 aa9.44□□□□□ -0.9
RFFL-204ENST00000414419 KRT77Q7Z794 578 aa9.44□□□□□ -0.9
RFFL-204ENST00000414419 SPERTQ8NA61 448 aa9.44□□□□□ -0.9
RFFL-204ENST00000414419 BBS1Q8NFJ9 593 aa9.44□□□□□ -0.9
RFFL-204ENST00000414419 LRTOMTQ8WZ04 291 aa9.44□□□□□ -0.9
RFFL-204ENST00000414419 TMEM158Q8WZ71 300 aa9.44□□□□□ -0.9
RFFL-204ENST00000414419 DUS3LQ96G46 650 aaKnown RBP9.44□□□□□ -0.9
RFFL-204ENST00000414419 CENPNQ96H22 339 aaPredicted RBP9.44□□□□□ -0.9
RFFL-204ENST00000414419 PGAM5Q96HS1 289 aa9.44□□□□□ -0.9
RFFL-204ENST00000414419 SIGLEC11Q96RL6 698 aa9.44□□□□□ -0.9
RFFL-204ENST00000414419 MDFIQ99750 246 aa9.44□□□□□ -0.9
RFFL-204ENST00000414419 ADAT1Q9BUB4 502 aaKnown RBP9.44□□□□□ -0.9
RFFL-204ENST00000414419 OR10A2Q9H208 303 aa9.44□□□□□ -0.9
RFFL-204ENST00000414419 METRNQ9UJH8 293 aa9.44□□□□□ -0.9
RFFL-204ENST00000414419 PPIAL4EA0A075B759 164 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 PPIAL4DF5H284 164 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 J3QLI3 93 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 PHF1O43189 567 aaPredicted RBP9.43□□□□□ -0.9
RFFL-204ENST00000414419 MITFO75030 526 aaPredicted RBP9.43□□□□□ -0.9
RFFL-204ENST00000414419 PPIAL4FP0DN26 164 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 GATA3P23771 443 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 OPRL1P41146 370 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 CD200P41217 278 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 GATA4P43694 442 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 ZNF121P58317 390 aaPredicted RBP9.43□□□□□ -0.9
RFFL-204ENST00000414419 HNRNPA0Q13151 305 aaKnown RBP9.43□□□□□ -0.9
RFFL-204ENST00000414419 MAB21L1Q13394 359 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 ZMYND11Q15326 602 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 ZNF181Q2M3W8 571 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 GFOD2Q3B7J2 385 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 ESCO2Q56NI9 601 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 LIPNQ5VXI9 398 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 KCTD18Q6PI47 426 aaPredicted RBP9.43□□□□□ -0.9
RFFL-204ENST00000414419 ASRGL1Q7L266 308 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 SLC16A9Q7RTY1 509 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 KLBQ86Z14 1044 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 C10orf67Q8IYJ2 551 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 FTMTQ8N4E7 242 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 OR56B2PQ8NGI1 322 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 OR8S1Q8NH09 359 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 REEP6Q96HR9 211 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 AMELYQ99218 206 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 TEAD3Q99594 435 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 YIPF3Q9GZM5 350 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 GABARAPL1Q9H0R8 117 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 SEMA6AQ9H2E6 1030 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 OCEL1Q9H607 264 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 NIPAL2Q9H841 368 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 FN3KRPQ9HA64 309 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 PATZ1Q9HBE1 687 aaKnown RBP9.43□□□□□ -0.9
RFFL-204ENST00000414419 UFSP2Q9NUQ7 469 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 C14orf119Q9NWQ9 140 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 MIOXQ9UGB7 285 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 PPIAL4AQ9Y536 164 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 MXRA5Q9NR99 2828 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 COL6A5A8TX70 2615 aa9.43□□□□□ -0.9
RFFL-204ENST00000414419 A0A1B0GWJ7 208 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 C5orf63A6NC05 138 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 EBAG9O00559 213 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 PRKYO43930 277 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 ZNF205O95201 554 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 MRPL3P09001 348 aaKnown RBP9.42□□□□□ -0.9
RFFL-204ENST00000414419 RPS2P15880 293 aaKnown RBP9.42□□□□□ -0.9
RFFL-204ENST00000414419 ALOX5APP20292 161 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 SLC2A5P22732 501 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 RBMXP38159 391 aaKnown RBP9.42□□□□□ -0.9
RFFL-204ENST00000414419 FAM3AP98173 230 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 SNCBQ16143 134 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 PRAMEF6Q5VXH4 476 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 KDM4DQ6B0I6 523 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 LRRN1Q6UXK5 716 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 RFLNBQ8N5W9 214 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 TCEANCQ8N8B7 351 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 PLPP7Q8NBV4 271 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 CSNK2A3Q8NEV1 391 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 PYDC1Q8WXC3 89 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 SPSB4Q96A44 273 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 SGK3Q96BR1 496 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 MROQ9BYG7 248 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 RGCCQ9H4X1 137 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 C7orf69Q9H7B7 122 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 METTL17Q9H7H0 456 aaPredicted RBP9.42□□□□□ -0.9
RFFL-204ENST00000414419 G6PC2Q9NQR9 355 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 RNF7Q9UBF6 113 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 TMEM14AQ9Y6G1 99 aa9.42□□□□□ -0.9
RFFL-204ENST00000414419 SAC3D1A6NKF1 404 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 SLC22A31A6NKX4 558 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 A6NLC8 198 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 ZAR1LA6NP61 321 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 CEACAM18A8MTB9 384 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 TCF21O43680 179 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 FAM20BO75063 409 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 GRPP07492 148 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 ANOS1P23352 680 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 CPT2P23786 658 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 GNALP38405 381 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 PMELP40967 661 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 GSK3AP49840 483 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 HCCSP53701 268 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms