RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 TIGD6Q17RP2 521 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 TMEM155Q4W5P6 130 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 C1orf146Q5VVC0 180 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 LIPNQ5VXI9 398 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 SFRP4Q6FHJ7 346 aaPredicted RBP8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 LYPD2Q6UXB3 125 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 ZNF826PQ6ZT77 177 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 SHFQ7M4L6 423 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 OR56B2PQ8NGI1 322 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 OR5K1Q8NHB7 308 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 RNF133Q8WVZ7 376 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 LRTOMTQ8WZ04 291 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 REEP6Q96HR9 211 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 PGAM5Q96HS1 289 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 TMEM246Q9BRR3 403 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 ADAT1Q9BUB4 502 aaKnown RBP8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 C19orf24Q9BVV8 132 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 TEX12Q9BXU0 123 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 TTTY10Q9BZA0 68 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 SEMA6AQ9H2E6 1030 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 C1orf123Q9NWV4 160 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 ZNF319Q9P2F9 582 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 OPN4Q9UHM6 478 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 KLHDC2Q9Y2U9 406 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 PPIAL4AQ9Y536 164 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 AP4S1Q9Y587 144 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 MALRD1Q5VYJ5 2156 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 LRRC30A6NM36 301 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 G3V2T6 193 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 GMDSO60547 372 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 ATP5HO75947 161 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 VENTXO95231 258 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 WNT2P09544 360 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 RPS2P15880 293 aaKnown RBP8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 HOXB6P17509 224 aaKnown RBP8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 CD80P33681 288 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 THBS2P35442 1172 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 OPRL1P41146 370 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 CD200P41217 278 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 FAM3AP98173 230 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 ATP6AP1Q15904 470 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 ESCO2Q56NI9 601 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 FAHD1Q6P587 224 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 LRRN1Q6UXK5 716 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 SLC16A9Q7RTY1 509 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 KLBQ86Z14 1044 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 RFLNBQ8N5W9 214 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 OR11L1Q8NGX0 322 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 OTOSQ8NHW6 89 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 NRBF2Q96F24 287 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 TOR3AQ9H497 397 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 MARCH7Q9H992 704 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 FN3KRPQ9HA64 309 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 SLC25A19Q9HC21 320 aa8.53□□□□□ -1.04
NCKIPSD-202ENST00000413374 IGHV3OR16-10A0A075B7F0 116 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 A0A1B0GWJ7 208 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 hCG_1807616A0A1W2PRN6 198 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 A6NLC8 198 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 ANKRD30BLA7E2S9 258 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 F5H0A9 414 aaPredicted RBP8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 C3orf80F5H4A9 247 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 IFNL4K9M1U5 179 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 MAGEB4O15481 346 aaPredicted RBP8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 XRCC2O43543 280 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 PRKYO43930 277 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 CIB2O75838 187 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 EPHA1P21709 976 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 FASP25445 335 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 EPHA2P29317 976 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 GSK3AP49840 483 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 GNB2P62879 340 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 PRSS45Q7RTY3 260 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 KRT77Q7Z794 578 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 C1orf87Q8N0U7 546 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 MUC20Q8N307 709 aaPredicted RBP8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 TCEANCQ8N8B7 351 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 OR8S1Q8NH09 359 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 NANPQ8TBE9 248 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 TEAD3Q99594 435 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 SLC22A4Q9H015 551 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 OR10A2Q9H208 303 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 RASSF4Q9H2L5 321 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 MMADHCQ9H3L0 296 aaPredicted RBP8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 KRT84Q9NSB2 600 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 MRPL15Q9P015 296 aaKnown RBP8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 RNF7Q9UBF6 113 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 LAMP5Q9UJQ1 280 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 RHBDD3Q9Y3P4 386 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 AUP1Q9Y679 476 aa8.52□□□□□ -1.05
NCKIPSD-202ENST00000413374 IGHV3OR15-7A0A075B7D8 119 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 CCDC182A6NF36 153 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 SAC3D1A6NKF1 404 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 J3QLI3 93 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 PRODHO43272 600 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 APOC1P02654 83 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 ALOX5APP20292 161 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 SLC2A5P22732 501 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 POLR2IP36954 125 aaKnown RBP8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 GATA4P43694 442 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms