RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 EMC7Q9NPA0 242 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 BEX4Q9NWD9 120 aaPredicted RBP-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 C14orf119Q9NWQ9 140 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 ELOVL2Q9NXB9 296 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 SPHK1Q9NYA1 384 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 RASL12Q9NYN1 266 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 AMACRQ9UHK6 382 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 CLEC2DQ9UHP7 191 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 SAP30BPQ9UHR5 308 aaKnown RBP-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 EMCNQ9ULC0 261 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 TFR2Q9UP52 801 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 AURKCQ9UQB9 309 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 TDRKHQ9Y2W6 561 aaKnown RBP-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 RRP15Q9Y3B9 282 aaKnown RBP-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 COL4A3BPQ9Y5P4 624 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 FADS3Q9Y5Q0 445 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 ATP10BO94823 1461 aa-2.22□□□□□ -2.77
RNU4-88P-201ENST00000411220 KIF13BQ9NQT8 1826 aa-2.22□□□□□ -2.77
RNU4-88P-201ENST00000411220 WDR62O43379 1518 aa-2.22□□□□□ -2.77
RNU4-88P-201ENST00000411220 VPS13AQ96RL7 3174 aa-2.22□□□□□ -2.77
RNU4-88P-201ENST00000411220 REREQ9P2R6 1566 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 LOC107984640A0A0U1RRK4 108 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 SMIM28A0A1B0GU29 152 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 LOC102725191A0A1B0GVB3 256 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 PRSS51A0A1B0GVH4 220 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 TRBV6-4A0A1B0GX49 114 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 ELOVL7A1L3X0 281 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 C5orf52A6NGY3 159 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 LRRIQ4A6NIV6 560 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 HMSDA8MTL9 139 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 TMCO5BA8MYB1 307 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 POLR3GO15318 223 aaPredicted RBP-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 MLNRO43193 412 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 SPOPO43791 374 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 TPST2O60704 377 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 EIF1BO60739 113 aaKnown RBP-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 RNASEH1O60930 286 aaKnown RBP-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 PSIP1O75475 530 aaKnown RBP-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 RPP40O75818 363 aaKnown RBP-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 RPN2P04844 631 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 RPLP2P05387 115 aaKnown RBP-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 CTSDP07339 412 aaPredicted RBP-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 TNP1P09430 55 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 JMJD7P0C870 316 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 LIPCP11150 499 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 PCNAP12004 261 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 HPGDP15428 266 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 PTPN6P29350 595 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 CD80P33681 288 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 EIF1P41567 113 aaKnown RBP-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 GSTM5P46439 218 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 GABRA2P47869 451 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 SLC9A3P48764 834 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 PPT1P50897 306 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 ALDH3A2P51648 485 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 PLTPP55058 493 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 MFAP3P55082 362 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 CMC4P56277 68 aaPredicted RBP-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 FXYD4P59646 89 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 RAB4BP61018 213 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 HLA-DRB3P79483 266 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 PLOD1Q02809 727 aaPredicted RBP-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 PUDPQ08623 228 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 ILKQ13418 452 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 AQP6Q13520 282 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 DGCR6Q14129 220 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 MESDQ14696 234 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 PCLAFQ15004 111 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 EMC2Q15006 297 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 DHCR24Q15392 516 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 INSCQ1MX18 579 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 C2orf68Q2NKX9 166 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 ALKBH6Q3KRA9 238 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 AGKQ53H12 422 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 TMEM196Q5HYL7 178 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 COA6Q5JTJ3 125 aaKnown RBP-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 GLRA4Q5JXX5 417 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 MPP7Q5T2T1 576 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 TMCO4Q5TGY1 634 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 FAM104BQ5XKR9 115 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 FUT10Q6P4F1 479 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 APOOLQ6UXV4 268 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 Q6ZSR3 168 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 Q6ZVQ6 151 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 H2AFVQ71UI9 128 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 AAED1Q7RTV5 226 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 GLT6D1Q7Z4J2 308 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 CCDC50Q8IVM0 306 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 SKA3Q8IX90 412 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 BAP18Q8IXM2 172 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 IQCKQ8N0W5 287 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 PUSL1Q8N0Z8 303 aaKnown RBP-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR6V1Q8N148 313 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 GCSAMQ8N6F7 178 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 LEMD2Q8NC56 503 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 NEK11Q8NG66 645 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 DQX1Q8TE96 717 aaKnown RBP-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 TWIST2Q8WVJ9 160 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 CYGBQ8WWM9 190 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 ARPC1AQ92747 370 aa-2.23□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms