RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 TMEM202A6NGA9 273 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 HOXC8P31273 242 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 KIR2DS4P43632 304 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 TPBGQ13641 420 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 KIR2DS1Q14954 304 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 OR6M1Q8NGM8 313 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 BTF3L4Q96K17 158 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 Q96M85 177 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 TGIF2Q9GZN2 237 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 ZMAT5Q9UDW3 170 aaKnown RBP10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 AMMECR1Q9Y4X0 333 aaPredicted RBP10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 G3V3Q6 166 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 TMPRSS2O15393 492 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 TAGLNQ01995 201 aaKnown RBP10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 TBCEQ15813 527 aaPredicted RBP10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 DUSP6Q16828 381 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 SPRED1Q7Z699 444 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 TTC9Q92623 222 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 RPUSD4Q96CM3 377 aaKnown RBP10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 OPALINQ96PE5 141 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 FBXO8Q9NRD0 319 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 F2RL2O00254 374 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 CXCL13O43927 109 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 TNFRSF1AP19438 455 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 BTG2P78543 158 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 Q499Y3 187 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 SPINK9Q5DT21 86 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 LCN15Q6UWW0 184 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 HSD17B10Q99714 261 aaKnown RBP10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 TCEAL7Q9BRU2 100 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 SDR39U1Q9NRG7 319 aaPredicted RBP10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 ZNF230Q9UIE0 474 aaPredicted RBP10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 RNF24Q9Y225 148 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 GFYI3L273 518 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 LYZL6O75951 148 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 HTR1FP30939 366 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 PRRX1P54821 245 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 ZXDAP98168 799 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 DUSP5Q16690 384 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 PRSS36Q5K4E3 855 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 AVPI1Q5T686 147 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 LYRM4Q9HD34 91 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 STRAPQ9Y3F4 350 aaKnown RBP10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 HPP00738 406 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 MMP7P09237 267 aaPredicted RBP10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 SLC25A4P12235 298 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 PSMB2P49721 201 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 ZNF121P58317 390 aaPredicted RBP10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 PAQR9Q6ZVX9 377 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 PXT1Q8NFP0 134 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 OR1B1Q8NGR6 318 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 CCL4L1Q8NHW4 92 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 TSLPQ969D9 159 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 C14orf79Q96F83 325 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 CXorf36Q9H7Y0 433 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 ADAM29Q9UKF5 820 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 GPR45Q9Y5Y3 372 aa10.19□□□□□ -0.78
PRPF40A-202ENST00000410080 CSNK1G2P78368 415 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 METRNLQ641Q3 311 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 IL22RA2Q969J5 263 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 ISL2Q96A47 359 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 ALKBH3Q96Q83 286 aaPredicted RBP10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 MED17Q9NVC6 651 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 EMCNQ9ULC0 261 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 HS3ST2Q9Y278 367 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 ZNF195O14628 629 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 CCSMST1Q4G0I0 132 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 UBE2L6O14933 153 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 SIX6O95475 246 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 RRN3P1Q2M238 152 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 TMEM108Q6UXF1 575 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 ZNF620Q6ZNG0 422 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 GLCCI1Q86VQ1 547 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 CBR3O75828 277 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 DUS4LO95620 317 aaKnown RBP10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 MT-ND4LP03901 98 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 ALDOCP09972 364 aaKnown RBP10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 H2AFB1P0C5Y9 115 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 RNF141Q8WVD5 230 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 MS4A8Q9BY19 250 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 NQO2P16083 231 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 PMP22Q01453 160 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 TMEM240Q5SV17 173 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 MMP17Q9ULZ9 603 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 KPTNQ9Y664 436 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 F5P12259 2224 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 PPP5D1E7EU14 171 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 SPRY1O43609 319 aaPredicted RBP10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 SUMO1P63165 101 aaKnown RBP10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 THSD4Q6ZMP0 1018 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 ARRDC2Q8TBH0 407 aa10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 SEBOXQ9HB31 216 aaPredicted RBP10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 AHDC1Q5TGY3 1603 aaPredicted RBP10.18□□□□□ -0.78
PRPF40A-202ENST00000410080 CTXN2P0C2S0 81 aa10.17□□□□□ -0.78
PRPF40A-202ENST00000410080 COX6B1P14854 86 aa10.17□□□□□ -0.78
PRPF40A-202ENST00000410080 SLC48A1Q6P1K1 146 aa10.17□□□□□ -0.78
PRPF40A-202ENST00000410080 CHODLQ9H9P2 273 aa10.17□□□□□ -0.78
PRPF40A-202ENST00000410080 DOK5Q9P104 306 aa10.17□□□□□ -0.78
PRPF40A-202ENST00000410080 ABCA3Q99758 1704 aa10.17□□□□□ -0.78
PRPF40A-202ENST00000410080 TRBV23-1A0A0A0MS06 115 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms