RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 IGHG1P01857 330 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 H2AFB1P0C5Y9 115 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 HIST1H1DP16402 221 aaKnown RBP14.78□□□□□ -0.04
LIMS2-208ENST00000410011 P2RY4P51582 365 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 PDSS1Q5T2R2 415 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 SLC25A47Q6Q0C1 308 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 GLIPR1L1Q6UWM5 242 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 PEG10Q86TG7 708 aaKnown RBP14.78□□□□□ -0.04
LIMS2-208ENST00000410011 UEVLDQ8IX04 471 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 NOXO1Q8NFA2 376 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 OR2AJ1Q8NGZ0 328 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 OR51E1Q8TCB6 317 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 RAB3CQ96E17 227 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 RNF126Q9BV68 326 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 EMC6Q9BV81 110 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 NKX6-2Q9C056 277 aaPredicted RBP14.78□□□□□ -0.04
LIMS2-208ENST00000410011 LMAN1LQ9HAT1 526 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 MRPS28Q9Y2Q9 187 aaKnown RBP14.78□□□□□ -0.04
LIMS2-208ENST00000410011 B3GALT1Q9Y5Z6 326 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 LOC100509620A0A075B734 347 aa14.77□□□□□ -0.04
LIMS2-208ENST00000410011 A0A0A6YYD4 124 aa14.77□□□□□ -0.04
LIMS2-208ENST00000410011 IGHV3-20A0A0C4DH32 117 aa14.77□□□□□ -0.04
LIMS2-208ENST00000410011 LOC102725191A0A1B0GVB3 256 aa14.77□□□□□ -0.04
LIMS2-208ENST00000410011 C2orf72A6NCS6 295 aa14.77□□□□□ -0.04
LIMS2-208ENST00000410011 PMP2P02689 132 aa14.77□□□□□ -0.04
LIMS2-208ENST00000410011 CD79AP11912 226 aa14.77□□□□□ -0.04
LIMS2-208ENST00000410011 TPT1P13693 172 aaKnown RBP14.77□□□□□ -0.04
LIMS2-208ENST00000410011 SERPINF1P36955 418 aa14.77□□□□□ -0.04
LIMS2-208ENST00000410011 MYBPHQ13203 477 aa14.77□□□□□ -0.04
LIMS2-208ENST00000410011 MICBQ29980 383 aa14.77□□□□□ -0.04
LIMS2-208ENST00000410011 PLPPR5Q32ZL2 321 aa14.77□□□□□ -0.04
LIMS2-208ENST00000410011 CCDC157Q569K6 752 aa14.77□□□□□ -0.04
LIMS2-208ENST00000410011 BEX5Q5H9J7 111 aa14.77□□□□□ -0.04
LIMS2-208ENST00000410011 PLAC9Q5JTB6 97 aa14.77□□□□□ -0.04
LIMS2-208ENST00000410011 C16orf47Q6ZP98 133 aaPredicted RBP14.77□□□□□ -0.04
LIMS2-208ENST00000410011 KCTD9Q7L273 389 aa14.77□□□□□ -0.04
LIMS2-208ENST00000410011 ZNF101Q8IZC7 436 aa14.77□□□□□ -0.04
LIMS2-208ENST00000410011 OR5L2Q8NGL0 311 aa14.77□□□□□ -0.04
LIMS2-208ENST00000410011 OR6X1Q8NH79 312 aa14.77□□□□□ -0.04
LIMS2-208ENST00000410011 MARCH1Q8TCQ1 289 aa14.77□□□□□ -0.04
LIMS2-208ENST00000410011 CASTOR1Q8WTX7 329 aa14.77□□□□□ -0.04
LIMS2-208ENST00000410011 DUSP15Q9H1R2 295 aaPredicted RBP14.77□□□□□ -0.04
LIMS2-208ENST00000410011 PCDHB10Q9UN67 800 aa14.77□□□□□ -0.04
LIMS2-208ENST00000410011 FER1L5A0AVI2 2057 aa14.77□□□□□ -0.05
LIMS2-208ENST00000410011 CDC14BO60729 498 aa14.77□□□□□ -0.05
LIMS2-208ENST00000410011 ATG12O94817 140 aa14.77□□□□□ -0.05
LIMS2-208ENST00000410011 SFT2D2O95562 160 aa14.77□□□□□ -0.05
LIMS2-208ENST00000410011 CTSSP25774 331 aa14.77□□□□□ -0.05
LIMS2-208ENST00000410011 FKBP2P26885 142 aaKnown RBP14.77□□□□□ -0.05
LIMS2-208ENST00000410011 ZNF41P51814 821 aaPredicted RBP14.77□□□□□ -0.05
LIMS2-208ENST00000410011 CLRN1P58418 232 aa14.77□□□□□ -0.05
LIMS2-208ENST00000410011 GABREP78334 506 aa14.77□□□□□ -0.05
LIMS2-208ENST00000410011 STK11Q15831 433 aa14.77□□□□□ -0.05
LIMS2-208ENST00000410011 HIST3H3Q16695 136 aa14.77□□□□□ -0.05
LIMS2-208ENST00000410011 PTCRAQ6ISU1 281 aaPredicted RBP14.77□□□□□ -0.05
LIMS2-208ENST00000410011 FAM89BQ8N5H3 189 aa14.77□□□□□ -0.05
LIMS2-208ENST00000410011 OR56B1Q8NGI3 324 aa14.77□□□□□ -0.05
LIMS2-208ENST00000410011 RELTQ969Z4 430 aa14.77□□□□□ -0.05
LIMS2-208ENST00000410011 NICN1Q9BSH3 213 aa14.77□□□□□ -0.05
LIMS2-208ENST00000410011 GHRLQ9UBU3 117 aa14.77□□□□□ -0.05
LIMS2-208ENST00000410011 TMEM218A2RU14 115 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 C5orf51A6NDU8 294 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 EEF1E1-BLOC1S5C9J1V9 151 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 GIMD1P0DJR0 217 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 SRFP11831 508 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 PGAM2P15259 253 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 ZNF17P17021 662 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 ALDH3B1P43353 468 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 TMEM50BP56557 158 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 DEFA5Q01523 94 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 ATXN7L3Q14CW9 347 aaPredicted RBP14.76□□□□□ -0.05
LIMS2-208ENST00000410011 BAP18Q8IXM2 172 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 POC1BQ8TC44 478 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 ZNF416Q9BWM5 594 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 C5orf66Q9H5L9 145 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 PCDHB16Q9NRJ7 776 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 PURGQ9UJV8 347 aaKnown RBP14.76□□□□□ -0.05
LIMS2-208ENST00000410011 CSAG2Q9Y5P2 127 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 H3BML4 177 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 MFNGO00587 321 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 NDUFA2O43678 99 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 TRAF3IP2O43734 574 aaPredicted RBP14.76□□□□□ -0.05
LIMS2-208ENST00000410011 FPR2P25090 351 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 C10orf91Q5T1B1 145 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 DOK3Q7L591 496 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 LHFPL1Q86WI0 220 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 ARMC10Q8N2F6 343 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 GTPBP8Q8N3Z3 284 aaPredicted RBP14.76□□□□□ -0.05
LIMS2-208ENST00000410011 ESX1Q8N693 406 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 TMEM104Q8NE00 496 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 OR1S2Q8NGQ3 325 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 RNF141Q8WVD5 230 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 URM1Q9BTM9 101 aaKnown RBP14.76□□□□□ -0.05
LIMS2-208ENST00000410011 TMEM59Q9BXS4 323 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 PNRC2Q9NPJ4 139 aaKnown RBP14.76□□□□□ -0.05
LIMS2-208ENST00000410011 PPP4R1LQ9P1A2 415 aa14.76□□□□□ -0.05
LIMS2-208ENST00000410011 SMAD9O15198 467 aaKnown RBP14.75□□□□□ -0.05
LIMS2-208ENST00000410011 NUPL2O15504 423 aaKnown RBP14.75□□□□□ -0.05
LIMS2-208ENST00000410011 HEXBP07686 556 aa14.75□□□□□ -0.05
LIMS2-208ENST00000410011 BCKDHBP21953 392 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms