RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 ACHEP22303 614 aa18.97■□□□□ 0.63
PTCD3-203ENST00000409783 ATP6V1E1P36543 226 aa18.97■□□□□ 0.63
PTCD3-203ENST00000409783 CAPGP40121 348 aa18.97■□□□□ 0.63
PTCD3-203ENST00000409783 CRYBB2P43320 205 aa18.97■□□□□ 0.63
PTCD3-203ENST00000409783 MMP16P51512 607 aa18.97■□□□□ 0.63
PTCD3-203ENST00000409783 FAM3AP98173 230 aa18.97■□□□□ 0.63
PTCD3-203ENST00000409783 MFGE8Q08431 387 aaPredicted RBP18.97■□□□□ 0.63
PTCD3-203ENST00000409783 CARTPTQ16568 116 aa18.97■□□□□ 0.63
PTCD3-203ENST00000409783 OR2Z1Q8NG97 314 aa18.97■□□□□ 0.63
PTCD3-203ENST00000409783 OR13G1Q8NGZ3 307 aa18.97■□□□□ 0.63
PTCD3-203ENST00000409783 ELMOD3Q96FG2 381 aa18.97■□□□□ 0.63
PTCD3-203ENST00000409783 LYZL4Q96KX0 146 aa18.97■□□□□ 0.63
PTCD3-203ENST00000409783 SAP30LQ9HAJ7 183 aa18.97■□□□□ 0.63
PTCD3-203ENST00000409783 AMBNQ9NP70 447 aa18.97■□□□□ 0.63
PTCD3-203ENST00000409783 DECR2Q9NUI1 292 aa18.97■□□□□ 0.63
PTCD3-203ENST00000409783 TMEM269A0A1B0GVZ9 245 aa18.96■□□□□ 0.63
PTCD3-203ENST00000409783 SNTNA6NMZ2 147 aa18.96■□□□□ 0.63
PTCD3-203ENST00000409783 GNAO1P09471 354 aa18.96■□□□□ 0.63
PTCD3-203ENST00000409783 INHBBP09529 407 aa18.96■□□□□ 0.63
PTCD3-203ENST00000409783 NR4A2P43354 598 aa18.96■□□□□ 0.63
PTCD3-203ENST00000409783 TNFAIP6P98066 277 aaPredicted RBP18.96■□□□□ 0.63
PTCD3-203ENST00000409783 IL5RAQ01344 420 aa18.96■□□□□ 0.63
PTCD3-203ENST00000409783 RIPK1Q13546 671 aa18.96■□□□□ 0.63
PTCD3-203ENST00000409783 SMN1Q16637 294 aaKnown RBP18.96■□□□□ 0.63
PTCD3-203ENST00000409783 TIGD6Q17RP2 521 aa18.96■□□□□ 0.63
PTCD3-203ENST00000409783 MAPK1IP1LQ8NDC0 245 aa18.96■□□□□ 0.63
PTCD3-203ENST00000409783 OR56B2PQ8NGI1 322 aa18.96■□□□□ 0.63
PTCD3-203ENST00000409783 PPP1R14AQ96A00 147 aa18.96■□□□□ 0.63
PTCD3-203ENST00000409783 PIMREGQ9BSJ6 248 aa18.96■□□□□ 0.63
PTCD3-203ENST00000409783 BPESC1Q9GZL8 116 aa18.96■□□□□ 0.63
PTCD3-203ENST00000409783 RGCCQ9H4X1 137 aa18.96■□□□□ 0.63
PTCD3-203ENST00000409783 CHODLQ9H9P2 273 aa18.96■□□□□ 0.63
PTCD3-203ENST00000409783 ZNF275Q9NSD4 429 aaPredicted RBP18.96■□□□□ 0.63
PTCD3-203ENST00000409783 MRPS18AQ9NVS2 196 aaKnown RBP18.96■□□□□ 0.63
PTCD3-203ENST00000409783 CACNG2Q9Y698 323 aa18.96■□□□□ 0.63
PTCD3-203ENST00000409783 DYSFO75923 2080 aa18.96■□□□□ 0.63
PTCD3-203ENST00000409783 GGT3PA6NGU5 568 aa18.95■□□□□ 0.62
PTCD3-203ENST00000409783 SMAD7O15105 426 aaKnown RBP18.95■□□□□ 0.62
PTCD3-203ENST00000409783 CDC14BO60729 498 aa18.95■□□□□ 0.62
PTCD3-203ENST00000409783 IGLV3-1P01715 115 aa18.95■□□□□ 0.62
PTCD3-203ENST00000409783 IL18R1Q13478 541 aa18.95■□□□□ 0.62
PTCD3-203ENST00000409783 PLEKHG7Q6ZR37 379 aa18.95■□□□□ 0.62
PTCD3-203ENST00000409783 ZNF771Q7L3S4 317 aaPredicted RBP18.95■□□□□ 0.62
PTCD3-203ENST00000409783 OR10AD1Q8NGE0 317 aa18.95■□□□□ 0.62
PTCD3-203ENST00000409783 CNIH3Q8TBE1 160 aa18.95■□□□□ 0.62
PTCD3-203ENST00000409783 SPRYD4Q8WW59 207 aaPredicted RBP18.95■□□□□ 0.62
PTCD3-203ENST00000409783 TFAP2CQ92754 450 aa18.95■□□□□ 0.62
PTCD3-203ENST00000409783 SOX7Q9BT81 388 aa18.95■□□□□ 0.62
PTCD3-203ENST00000409783 PBOV1Q9GZY1 135 aa18.95■□□□□ 0.62
PTCD3-203ENST00000409783 VCXQ9H320 206 aa18.95■□□□□ 0.62
PTCD3-203ENST00000409783 G6PC2Q9NQR9 355 aa18.95■□□□□ 0.62
PTCD3-203ENST00000409783 TMEM100Q9NV29 134 aa18.95■□□□□ 0.62
PTCD3-203ENST00000409783 IL19Q9UHD0 177 aa18.95■□□□□ 0.62
PTCD3-203ENST00000409783 NUFIP1Q9UHK0 495 aaKnown RBP18.95■□□□□ 0.62
PTCD3-203ENST00000409783 IGHV1-69-2A0A0G2JMI3 117 aa18.94■□□□□ 0.62
PTCD3-203ENST00000409783 METTL15A6NJ78 407 aa18.94■□□□□ 0.62
PTCD3-203ENST00000409783 H0YJX3 145 aa18.94■□□□□ 0.62
PTCD3-203ENST00000409783 SULT1C4O75897 302 aa18.94■□□□□ 0.62
PTCD3-203ENST00000409783 HLA-DPB1P04440 258 aa18.94■□□□□ 0.62
PTCD3-203ENST00000409783 GSK3AP49840 483 aa18.94■□□□□ 0.62
PTCD3-203ENST00000409783 ACTC1P68032 377 aa18.94■□□□□ 0.62
PTCD3-203ENST00000409783 ACTA1P68133 377 aa18.94■□□□□ 0.62
PTCD3-203ENST00000409783 LOXL1Q08397 574 aaPredicted RBP18.94■□□□□ 0.62
PTCD3-203ENST00000409783 OR8B8Q15620 311 aa18.94■□□□□ 0.62
PTCD3-203ENST00000409783 ZNF829Q3KNS6 432 aaPredicted RBP18.94■□□□□ 0.62
PTCD3-203ENST00000409783 ITLN1Q8WWA0 313 aa18.94■□□□□ 0.62
PTCD3-203ENST00000409783 RNF166Q96A37 237 aaPredicted RBP18.94■□□□□ 0.62
PTCD3-203ENST00000409783 SIGLEC11Q96RL6 698 aa18.94■□□□□ 0.62
PTCD3-203ENST00000409783 SMR3AQ99954 134 aa18.94■□□□□ 0.62
PTCD3-203ENST00000409783 ZNF649Q9BS31 505 aa18.94■□□□□ 0.62
PTCD3-203ENST00000409783 EGLN1Q9GZT9 426 aa18.94■□□□□ 0.62
PTCD3-203ENST00000409783 MRPL15Q9P015 296 aaKnown RBP18.94■□□□□ 0.62
PTCD3-203ENST00000409783 MYRFQ9Y2G1 1151 aa18.94■□□□□ 0.62
PTCD3-203ENST00000409783 R4GMQ9 66 aa18.94■□□□□ 0.62
PTCD3-203ENST00000409783 HSPE1-MOB4S4R3N1 261 aa18.94■□□□□ 0.62
PTCD3-203ENST00000409783 A0A0U1RQV5 110 aa18.93■□□□□ 0.62
PTCD3-203ENST00000409783 TPD52L2O43399 206 aaKnown RBP18.93■□□□□ 0.62
PTCD3-203ENST00000409783 IGHA1P01876 353 aa18.93■□□□□ 0.62
PTCD3-203ENST00000409783 KRT8P05787 483 aa18.93■□□□□ 0.62
PTCD3-203ENST00000409783 TNFSF4P23510 183 aa18.93■□□□□ 0.62
PTCD3-203ENST00000409783 CFL1P23528 166 aaKnown RBP18.93■□□□□ 0.62
PTCD3-203ENST00000409783 DDOSTP39656 456 aa18.93■□□□□ 0.62
PTCD3-203ENST00000409783 AQP4P55087 323 aa18.93■□□□□ 0.62
PTCD3-203ENST00000409783 HNRNPA0Q13151 305 aaKnown RBP18.93■□□□□ 0.62
PTCD3-203ENST00000409783 GFOD2Q3B7J2 385 aa18.93■□□□□ 0.62
PTCD3-203ENST00000409783 CDONQ4KMG0 1287 aa18.93■□□□□ 0.62
PTCD3-203ENST00000409783 LIPNQ5VXI9 398 aa18.93■□□□□ 0.62
PTCD3-203ENST00000409783 ACBD7Q8N6N7 88 aa18.93■□□□□ 0.62
PTCD3-203ENST00000409783 YIPF7Q8N8F6 280 aa18.93■□□□□ 0.62
PTCD3-203ENST00000409783 SETD9Q8NE22 299 aa18.93■□□□□ 0.62
PTCD3-203ENST00000409783 FBLIM1Q8WUP2 373 aa18.93■□□□□ 0.62
PTCD3-203ENST00000409783 OR2V2Q96R30 315 aa18.93■□□□□ 0.62
PTCD3-203ENST00000409783 RPL36Q9Y3U8 105 aaKnown RBP18.93■□□□□ 0.62
PTCD3-203ENST00000409783 PCDHGB1Q9Y5G3 927 aa18.93■□□□□ 0.62
PTCD3-203ENST00000409783 IGHV4-61A0A0C4DH41 118 aa18.92■□□□□ 0.62
PTCD3-203ENST00000409783 F5H5P2 479 aa18.92■□□□□ 0.62
PTCD3-203ENST00000409783 ATP6V1G2O95670 118 aa18.92■□□□□ 0.62
PTCD3-203ENST00000409783 TTRP02766 147 aa18.92■□□□□ 0.62
PTCD3-203ENST00000409783 CA6P23280 308 aa18.92■□□□□ 0.62
PTCD3-203ENST00000409783 ACKR3P25106 362 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms