RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 VCXQ9H320 206 aa16.85■□□□□ 0.29
PDLIM2-207ENST00000409417 TMEM100Q9NV29 134 aa16.85■□□□□ 0.29
PDLIM2-207ENST00000409417 TMEM269A0A1B0GVZ9 245 aa16.84■□□□□ 0.29
PDLIM2-207ENST00000409417 H0YHG0 523 aa16.84■□□□□ 0.29
PDLIM2-207ENST00000409417 USF1P22415 310 aaPredicted RBP16.84■□□□□ 0.29
PDLIM2-207ENST00000409417 DDOSTP39656 456 aa16.84■□□□□ 0.29
PDLIM2-207ENST00000409417 MMP16P51512 607 aa16.84■□□□□ 0.29
PDLIM2-207ENST00000409417 ZNF829Q3KNS6 432 aaPredicted RBP16.84■□□□□ 0.29
PDLIM2-207ENST00000409417 DHRSXQ8N5I4 330 aa16.84■□□□□ 0.29
PDLIM2-207ENST00000409417 MAPK1IP1LQ8NDC0 245 aa16.84■□□□□ 0.29
PDLIM2-207ENST00000409417 TBX5Q99593 518 aa16.84■□□□□ 0.29
PDLIM2-207ENST00000409417 FAM206AQ9NX38 181 aa16.84■□□□□ 0.29
PDLIM2-207ENST00000409417 IL19Q9UHD0 177 aa16.84■□□□□ 0.29
PDLIM2-207ENST00000409417 MRM2Q9UI43 246 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-207ENST00000409417 ADARB1P78563 741 aaKnown RBP16.83■□□□□ 0.28
PDLIM2-207ENST00000409417 FAM3AP98173 230 aa16.83■□□□□ 0.28
PDLIM2-207ENST00000409417 HFEQ30201 348 aa16.83■□□□□ 0.28
PDLIM2-207ENST00000409417 ZNF691Q5VV52 312 aa16.83■□□□□ 0.28
PDLIM2-207ENST00000409417 SSX6Q7RTT6 188 aa16.83■□□□□ 0.28
PDLIM2-207ENST00000409417 OR10AD1Q8NGE0 317 aa16.83■□□□□ 0.28
PDLIM2-207ENST00000409417 OR56B2PQ8NGI1 322 aa16.83■□□□□ 0.28
PDLIM2-207ENST00000409417 SLC22A4Q9H015 551 aa16.83■□□□□ 0.28
PDLIM2-207ENST00000409417 ZNF275Q9NSD4 429 aaPredicted RBP16.83■□□□□ 0.28
PDLIM2-207ENST00000409417 MRPL15Q9P015 296 aaKnown RBP16.83■□□□□ 0.28
PDLIM2-207ENST00000409417 ZNF391Q9UJN7 358 aa16.83■□□□□ 0.28
PDLIM2-207ENST00000409417 PCDHGB1Q9Y5G3 927 aa16.83■□□□□ 0.28
PDLIM2-207ENST00000409417 ABCA1O95477 2261 aa16.83■□□□□ 0.28
PDLIM2-207ENST00000409417 J3QRE1 110 aa16.82■□□□□ 0.28
PDLIM2-207ENST00000409417 MAGEB4O15481 346 aaPredicted RBP16.82■□□□□ 0.28
PDLIM2-207ENST00000409417 SULT1C4O75897 302 aa16.82■□□□□ 0.28
PDLIM2-207ENST00000409417 CLIC3O95833 236 aa16.82■□□□□ 0.28
PDLIM2-207ENST00000409417 KRT8P05787 483 aa16.82■□□□□ 0.28
PDLIM2-207ENST00000409417 TNFRSF1AP19438 455 aa16.82■□□□□ 0.28
PDLIM2-207ENST00000409417 ACTC1P68032 377 aa16.82■□□□□ 0.28
PDLIM2-207ENST00000409417 ACTA1P68133 377 aa16.82■□□□□ 0.28
PDLIM2-207ENST00000409417 ZNF91Q05481 1191 aa16.82■□□□□ 0.28
PDLIM2-207ENST00000409417 GFOD2Q3B7J2 385 aa16.82■□□□□ 0.28
PDLIM2-207ENST00000409417 SPRNQ5BIV9 151 aa16.82■□□□□ 0.28
PDLIM2-207ENST00000409417 ZNF684Q5T5D7 378 aa16.82■□□□□ 0.28
PDLIM2-207ENST00000409417 OR8B12Q8NGG6 310 aa16.82■□□□□ 0.28
PDLIM2-207ENST00000409417 APH1BQ8WW43 257 aa16.82■□□□□ 0.28
PDLIM2-207ENST00000409417 OR2V2Q96R30 315 aa16.82■□□□□ 0.28
PDLIM2-207ENST00000409417 SMR3AQ99954 134 aa16.82■□□□□ 0.28
PDLIM2-207ENST00000409417 ADI1Q9BV57 179 aa16.82■□□□□ 0.28
PDLIM2-207ENST00000409417 NOP16Q9Y3C1 178 aaKnown RBP16.82■□□□□ 0.28
PDLIM2-207ENST00000409417 A0A0U1RQV5 110 aa16.81■□□□□ 0.28
PDLIM2-207ENST00000409417 hCG_38984A0A1B0GV85 526 aa16.81■□□□□ 0.28
PDLIM2-207ENST00000409417 H0YAE9 185 aa16.81■□□□□ 0.28
PDLIM2-207ENST00000409417 H0YL77 283 aa16.81■□□□□ 0.28
PDLIM2-207ENST00000409417 MLNRO43193 412 aa16.81■□□□□ 0.28
PDLIM2-207ENST00000409417 HLA-DPB1P04440 258 aa16.81■□□□□ 0.28
PDLIM2-207ENST00000409417 GSK3AP49840 483 aa16.81■□□□□ 0.28
PDLIM2-207ENST00000409417 IL5RAQ01344 420 aa16.81■□□□□ 0.28
PDLIM2-207ENST00000409417 IL18R1Q13478 541 aa16.81■□□□□ 0.28
PDLIM2-207ENST00000409417 SETD9Q8NE22 299 aa16.81■□□□□ 0.28
PDLIM2-207ENST00000409417 CCL17Q92583 94 aa16.81■□□□□ 0.28
PDLIM2-207ENST00000409417 LGALS12Q96DT0 336 aa16.81■□□□□ 0.28
PDLIM2-207ENST00000409417 AMBNQ9NP70 447 aa16.81■□□□□ 0.28
PDLIM2-207ENST00000409417 NUFIP1Q9UHK0 495 aaKnown RBP16.81■□□□□ 0.28
PDLIM2-207ENST00000409417 EXOGQ9Y2C4 368 aaKnown RBP16.81■□□□□ 0.28
PDLIM2-207ENST00000409417 RPL36Q9Y3U8 105 aaKnown RBP16.81■□□□□ 0.28
PDLIM2-207ENST00000409417 CACNG2Q9Y698 323 aa16.81■□□□□ 0.28
PDLIM2-207ENST00000409417 IGHV4-61A0A0C4DH41 118 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 METTL15A6NJ78 407 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 SRSF10O75494 262 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 WBP4O75554 376 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 PNPP00491 289 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 DBTP11182 482 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 CA6P23280 308 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 CAPGP40121 348 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 GPR6P46095 362 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 SRP9P49458 86 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 PLEKHG7Q6ZR37 379 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 ACBD7Q8N6N7 88 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 YIPF7Q8N8F6 280 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 ITLN1Q8WWA0 313 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 NRG4Q8WWG1 115 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 PBOV1Q9GZY1 135 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 GSX1Q9H4S2 264 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 R4GMQ9 66 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 F5H5P2 479 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 PPIHO43447 177 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 GMDSO60547 372 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 FADS2O95864 444 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 TACSTD2P09758 323 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 ISL1P61371 349 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 ZNF85Q03923 595 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 SLC3A1Q07837 685 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 MFGE8Q08431 387 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 RAB40BQ12829 278 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 OR8B8Q15620 311 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 KLBQ86Z14 1044 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 ITFG2Q969R8 447 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 MEGF10Q96KG7 1140 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 LYZL4Q96KX0 146 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 SIGLEC11Q96RL6 698 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 MOB1AQ9H8S9 216 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 MRPS18AQ9NVS2 196 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 PPP1R3CQ9UQK1 317 aa16.8■□□□□ 0.28
PDLIM2-207ENST00000409417 HSPE1-MOB4S4R3N1 261 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms