RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 C2orf76Q3KRA6 126 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 ALKBH6Q3KRA9 238 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 CLVS2Q5SYC1 327 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 MYO7BQ6PIF6 2116 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 EGFL6Q8IUX8 553 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 SLC26A10Q8NG04 563 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 SNAPC3Q92966 411 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 FBXO17Q96EF6 278 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 HINT2Q9BX68 163 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 RYDENQ9NUL5 291 aaKnown RBP8.05□□□□□ -1.12
LIG4-202ENST00000405925 GNG12Q9UBI6 72 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 GBF1Q92538 1859 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 EFSO43281 561 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 CDK2P24941 298 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 CD34P28906 385 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 ZNF239Q16600 458 aaKnown RBP8.05□□□□□ -1.12
LIG4-202ENST00000405925 PLEKHN1Q494U1 663 aaPredicted RBP8.05□□□□□ -1.12
LIG4-202ENST00000405925 RND1Q92730 232 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 SLC7A10Q9NS82 523 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 QPCTLQ9NXS2 382 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 IGHA1P01876 353 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 DNASE1P24855 282 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 MPGP29372 298 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 FGF9P31371 208 aaPredicted RBP8.05□□□□□ -1.12
LIG4-202ENST00000405925 CRYBB2P43320 205 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 NR4A2P43354 598 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 CCR9P51686 369 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 EGR4Q05215 589 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 SLC25A30Q5SVS4 291 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 MEX3BQ6ZN04 569 aaKnown RBP8.05□□□□□ -1.12
LIG4-202ENST00000405925 DPPA2Q7Z7J5 298 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 ZNF573Q86YE8 665 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 SGPP2Q8IWX5 399 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 BMPERQ8N8U9 685 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 CCDC71LQ8N9Z2 235 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 PRR7Q8TB68 274 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 C7orf50Q9BRJ6 194 aaKnown RBP8.05□□□□□ -1.12
LIG4-202ENST00000405925 SEMA5BQ9P283 1151 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 FZR1Q9UM11 496 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 FLVCR1Q9Y5Y0 555 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 PKDREJQ9NTG1 2253 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 ZNF407Q9C0G0 2248 aa8.05□□□□□ -1.12
LIG4-202ENST00000405925 A0A0G2JMM0 328 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 A0A1W2PPB8 328 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 A0A1W2PRS3 328 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 ANKRD33BA6NCL7 494 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 LRRC30A6NM36 301 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 KIR3DP1A8MWS1 328 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 ZNF732B4DXR9 585 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 H3BMH7 237 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 M0QYG6 137 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 HS3ST1O14792 307 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 SERPINE2P07093 398 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 CELA3AP09093 270 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 TGM1P22735 817 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 MRPS34P82930 218 aaKnown RBP8.04□□□□□ -1.12
LIG4-202ENST00000405925 EIF2S3LQ2VIR3 472 aaKnown RBP8.04□□□□□ -1.12
LIG4-202ENST00000405925 HIKESHIQ53FT3 197 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 FBXW9Q5XUX1 488 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 IDO2Q6ZQW0 420 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 CDC20BQ86Y33 519 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 SIAH3Q8IW03 269 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 OR51A2Q8NGJ7 313 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 ZNF431Q8TF32 576 aaPredicted RBP8.04□□□□□ -1.12
LIG4-202ENST00000405925 RGCCQ9H4X1 137 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 NOX3Q9HBY0 568 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 NUBP2Q9Y5Y2 271 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 SLC17A2O00624 439 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 DEGS1O15121 323 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 AQP8O94778 261 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 LALBAP00709 142 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 ACSM4P0C7M7 580 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 ATF1P18846 271 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 DDOSTP39656 456 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 TAS2R46P59540 309 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 ZP4Q12836 540 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 CDK10Q15131 360 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 SFRP5Q5T4F7 317 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 TMEM211Q6ICI0 200 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 STEAP1BQ6NZ63 245 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 GPR155Q7Z3F1 870 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 CMTM4Q8IZR5 234 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.04□□□□□ -1.12
LIG4-202ENST00000405925 HAS2Q92819 552 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 GMPPAQ96IJ6 420 aaPredicted RBP8.04□□□□□ -1.12
LIG4-202ENST00000405925 NICN1Q9BSH3 213 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 COL25A1Q9BXS0 654 aaPredicted RBP8.04□□□□□ -1.12
LIG4-202ENST00000405925 RAB9BQ9NP90 201 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 ACKR4Q9NPB9 350 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 TMEM38BQ9NVV0 291 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 WDR87Q6ZQQ6 2873 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 KANTRA0A1W2PQU2 76 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 WDR1O75083 606 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 DHRS3O75911 302 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 PRH1P02810 166 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 THBS4P35443 961 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 TAS2R20P59543 309 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 PPA1Q15181 289 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 LHFPL2Q6ZUX7 228 aa8.04□□□□□ -1.12
LIG4-202ENST00000405925 SPERTQ8NA61 448 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms