RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 TOR3AQ9H497 397 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 OPA3Q9H6K4 179 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 MIOXQ9UGB7 285 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 OR5V1Q9UGF6 321 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 LRCH1Q9Y2L9 728 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 POLR3KQ9Y2Y1 108 aaPredicted RBP11.16□□□□□ -0.62
SDF4-203ENST00000403997 PPIAL4AQ9Y536 164 aa11.16□□□□□ -0.62
SDF4-203ENST00000403997 GSC2O15499 205 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 FAM20BO75063 409 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 APOC1P02654 83 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 ZNF12P17014 697 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 CPT2P23786 658 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 FPR2P25090 351 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 GNB2P62879 340 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 CDK5Q00535 292 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 ZNF154Q13106 437 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 MPPED2Q15777 294 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 ZNF404Q494X3 552 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 KLHL12Q53G59 568 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 KLBQ86Z14 1044 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 CPOQ8IVL8 374 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 TIGD4Q8IY51 512 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 BPIFB2Q8N4F0 458 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 BOLLQ8N9W6 283 aaKnown RBP11.15□□□□□ -0.62
SDF4-203ENST00000403997 DEFB108BQ8NET1 73 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 OR56B2PQ8NGI1 322 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 THEM6Q8WUY1 208 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 RNF133Q8WVZ7 376 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 NEIL1Q96FI4 390 aaPredicted RBP11.15□□□□□ -0.62
SDF4-203ENST00000403997 MRI1Q9BV20 369 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 TEX12Q9BXU0 123 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 SP140LQ9H930 580 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 MARCH7Q9H992 704 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 FN3KRPQ9HA64 309 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 BRD7Q9NPI1 651 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 DNAJC27Q9NZQ0 273 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 MRPL15Q9P015 296 aaKnown RBP11.15□□□□□ -0.62
SDF4-203ENST00000403997 INSIG2Q9Y5U4 225 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 AUP1Q9Y679 476 aa11.15□□□□□ -0.62
SDF4-203ENST00000403997 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.14□□□□□ -0.63
SDF4-203ENST00000403997 ANKRD30BLA7E2S9 258 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 A8MXK9 166 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 FSTL3O95633 263 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 GRPP07492 148 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 H2BFMP0C1H6 154 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 DDOSTP39656 456 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 ZNF121P58317 390 aaPredicted RBP11.14□□□□□ -0.63
SDF4-203ENST00000403997 BNIP1Q12981 228 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 TIGD6Q17RP2 521 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 TMEM236Q5W0B7 351 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 FAM57BQ71RH2 274 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 NLRC3Q7RTR2 1065 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 SLC16A9Q7RTY1 509 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.14□□□□□ -0.63
SDF4-203ENST00000403997 SPERTQ8NA61 448 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 C19orf18Q8NEA5 215 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 SEMA6DQ8NFY4 1073 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 OR8B3Q8NGG8 313 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 Q8TCH9 128 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 C22orf15Q8WYQ4 148 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 DVL3Q92997 716 aaPredicted RBP11.14□□□□□ -0.63
SDF4-203ENST00000403997 SPSB4Q96A44 273 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 SGK3Q96BR1 496 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 OR8B2Q96RD0 313 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 AMELYQ99218 206 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 SLC6A7Q99884 636 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 SUCNR1Q9BXA5 334 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 CADM1Q9BY67 442 aaKnown RBP11.14□□□□□ -0.63
SDF4-203ENST00000403997 KIF17Q9P2E2 1029 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 RNF7Q9UBF6 113 aa11.14□□□□□ -0.63
SDF4-203ENST00000403997 A6NLC8 198 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 SELENOFO60613 162 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 TIPRLO75663 272 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 LYNP07948 512 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 OPRL1P41146 370 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 RASSF2P50749 326 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 HILS1P60008 231 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 RPS7P62081 194 aaKnown RBP11.13□□□□□ -0.63
SDF4-203ENST00000403997 MZT1Q08AG7 82 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 ARMCX4Q5H9R4 360 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 SFRP4Q6FHJ7 346 aaPredicted RBP11.13□□□□□ -0.63
SDF4-203ENST00000403997 LYPD2Q6UXB3 125 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 USP43Q70EL4 1123 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 RHOUQ7L0Q8 258 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.13□□□□□ -0.63
SDF4-203ENST00000403997 ZNF454Q8N9F8 522 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 PLPP7Q8NBV4 271 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 OR52H1Q8NGJ2 320 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 OTOSQ8NHW6 89 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 ZFAND2BQ8WV99 257 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 NRBF2Q96F24 287 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 REEP6Q96HR9 211 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 PGAM5Q96HS1 289 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 JMJD8Q96S16 334 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 OR10A2Q9H208 303 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 NTN4Q9HB63 628 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 PAPOLBQ9NRJ5 636 aaKnown RBP11.13□□□□□ -0.63
SDF4-203ENST00000403997 C14orf119Q9NWQ9 140 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 C1orf123Q9NWV4 160 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 TVP23BQ9NYZ1 205 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms