RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 POP5Q969H6 163 aaKnown RBP3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 MCHR2Q969V1 340 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 MCUR1Q96AQ8 359 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 DNAJA3Q96EY1 480 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 MS4A4EQ96PG1 132 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 ECSITQ9BQ95 431 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 SLC39A3Q9BRY0 314 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 SLC35A5Q9BS91 424 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 THTPAQ9BU02 230 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 NGBQ9NPG2 151 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 CMTM6Q9NX76 183 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 GIN1Q9NXP7 522 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 MAT2BQ9NZL9 334 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 CTSFQ9UBX1 484 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 SLC7A8Q9UHI5 535 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 ZNF639Q9UID6 485 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 CFL2Q9Y281 166 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 L3MBTL1Q9Y468 752 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 RNF115Q9Y4L5 304 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 MMP24Q9Y5R2 645 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 SMAD5-AS1Q9Y6J3 95 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 CLCA3PQ9Y6N3 262 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 PRORSD1PA6NEY8 169 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 FAM220BPB1ANY3 271 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 UPK1AO00322 258 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 RAD1O60671 282 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 ALOX12BO75342 701 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 SRSF10O75494 262 aaKnown RBP3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 TOXO94900 526 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 IGKV3-11P04433 115 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 HMGN2P05204 90 aaKnown RBP3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 HEXBP07686 556 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 GUSBP08236 651 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 LIPCP11150 499 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 NT5EP21589 574 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 MMP11P24347 488 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 CHI3L1P36222 383 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 MAP3K8P41279 467 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 GZMMP51124 257 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 EFNA3P52797 238 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 CLDN6P56747 220 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 MTPNP58546 118 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 DSTNP60981 165 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 RPS15P62841 145 aaKnown RBP3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 KCNJ2P63252 427 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 PSPHP78330 225 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 LIPEQ05469 1076 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 GNA13Q14344 377 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 RGNQ15493 299 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 ZNF630Q2M218 657 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 TIMM50Q3ZCQ8 353 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 MLIPQ5VWP3 458 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 P4HA3Q7Z4N8 544 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 CCDC36Q8IYA8 594 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 ZNF615Q8N8J6 731 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 CDRT4Q8N9R6 151 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 B3GNT7Q8NFL0 401 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 OR7G2Q8NG99 324 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 OR10A6Q8NH74 314 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 ASB9Q96DX5 294 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 AURKBQ96GD4 344 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 SLC35G5Q96KT7 338 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 IP6K3Q96PC2 410 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 STACQ99469 402 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 KCTD14Q9BQ13 255 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 NMNAT2Q9BZQ4 307 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 PIGUQ9H490 435 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 IKZF5Q9H5V7 419 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 GORASP2Q9H8Y8 452 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 ASCL3Q9NQ33 180 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 TIGARQ9NQ88 270 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 YAE1D1Q9NRH1 226 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 SLC7A10Q9NS82 523 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 DCAF13Q9NV06 445 aaKnown RBP3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 DDX18Q9NVP1 670 aaKnown RBP3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 ADA2Q9NZK5 511 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 ACTR3BQ9P1U1 418 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 P2RX2Q9UBL9 471 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 ZNF107Q9UII5 783 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 C3orf18Q9UK00 162 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 POMPQ9Y244 141 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 FARSAQ9Y285 508 aaKnown RBP3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 AGRNO00468 2067 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 PTPRQQ9UMZ3 2332 aa3.75□□□□□ -1.81
HMGB3P19-201ENST00000403971 TNRC6AQ8NDV7 1962 aaKnown RBP3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 DNAJC13O75165 2243 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 SAGE2PA6NJ88 616 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 C11orf98E9PRG8 122 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 LGALS8O00214 317 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 HMGN4O00479 90 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 PHOX2AO14813 284 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 CIB2O75838 187 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 STAMBPO95630 424 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 AK1P00568 194 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 THY1P04216 161 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 IFNA16P05015 189 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 SNRPCP09234 159 aaKnown RBP3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 TFPTP0C1Z6 253 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 CT62P0C5K7 136 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms