RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 OCLNQ16625 522 aa16.23■□□□□ 0.19
RTN4-207ENST00000402434 ZNF322Q6U7Q0 402 aaPredicted RBP16.23■□□□□ 0.19
RTN4-207ENST00000402434 RFLNBQ8N5W9 214 aa16.23■□□□□ 0.19
RTN4-207ENST00000402434 OR51G2Q8NGK0 314 aa16.23■□□□□ 0.19
RTN4-207ENST00000402434 REEP6Q96HR9 211 aa16.23■□□□□ 0.19
RTN4-207ENST00000402434 PGAM5Q96HS1 289 aa16.23■□□□□ 0.19
RTN4-207ENST00000402434 MEGF10Q96KG7 1140 aa16.23■□□□□ 0.19
RTN4-207ENST00000402434 RDH12Q96NR8 316 aa16.23■□□□□ 0.19
RTN4-207ENST00000402434 GCM1Q9NP62 436 aa16.23■□□□□ 0.19
RTN4-207ENST00000402434 BRD7Q9NPI1 651 aa16.23■□□□□ 0.19
RTN4-207ENST00000402434 FAM118AQ9NWS6 357 aa16.23■□□□□ 0.19
RTN4-207ENST00000402434 TREM2Q9NZC2 230 aa16.23■□□□□ 0.19
RTN4-207ENST00000402434 MRPL15Q9P015 296 aaKnown RBP16.23■□□□□ 0.19
RTN4-207ENST00000402434 PPP1R3CQ9UQK1 317 aa16.23■□□□□ 0.19
RTN4-207ENST00000402434 GMPPBQ9Y5P6 360 aa16.23■□□□□ 0.19
RTN4-207ENST00000402434 F5H5P2 479 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 PSMD9O00233 223 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 DLGAP1O14490 977 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 SLC16A6O15403 523 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 GMDSO60547 372 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 OR2T7P0C7T2 308 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 IL2RGP31785 369 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 SRP9P49458 86 aaKnown RBP16.22■□□□□ 0.19
RTN4-207ENST00000402434 TIGD6Q17RP2 521 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 C6orf52Q5T4I8 152 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 MEDAGQ5VYS4 303 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 CELF2-AS1Q8N7Q2 184 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 OR56B2PQ8NGI1 322 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 OR2T27Q8NH04 317 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 CLDND2Q8NHS1 167 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 RAB1CQ92928 201 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 MSI2Q96DH6 328 aaKnown RBP16.22■□□□□ 0.19
RTN4-207ENST00000402434 TIMD4Q96H15 378 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 C1orf159Q96HA4 380 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 SOX7Q9BT81 388 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 TMEM106BQ9NUM4 274 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 FAM206AQ9NX38 181 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 ZNF391Q9UJN7 358 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.22■□□□□ 0.191e-12■■□□□ 13.7
RTN4-207ENST00000402434 NOP16Q9Y3C1 178 aaKnown RBP16.22■□□□□ 0.19
RTN4-207ENST00000402434 WIPI2Q9Y4P8 454 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 ABCA2Q9BZC7 2435 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 NAV3Q8IVL0 2385 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 LOC100130705A0A1B0GUX0 176 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 hCG_38984A0A1B0GV85 526 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 TMEM269A0A1B0GVZ9 245 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 ZNF670-ZNF695F2Z2N8 137 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 ENTPD6O75354 484 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 GABRB1P18505 474 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 CA6P23280 308 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 GATA4P43694 442 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 MMP16P51512 607 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 RIPPLY3P57055 190 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 LMO4P61968 165 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 EGR3Q06889 387 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 MAB21L1Q13394 359 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 KLBQ86Z14 1044 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 OR8B12Q8NGG6 310 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 RHOXF1Q8NHV9 184 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 C8orf4Q9NR00 106 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 DCAF16Q9NXF7 216 aa16.22■□□□□ 0.19
RTN4-207ENST00000402434 SMPD3Q9NY59 655 aaPredicted RBP16.22■□□□□ 0.19
RTN4-207ENST00000402434 MTNR1AP48039 350 aa16.21■□□□□ 0.19
RTN4-207ENST00000402434 GSK3AP49840 483 aa16.21■□□□□ 0.19
RTN4-207ENST00000402434 RIDAP52758 137 aaKnown RBP16.21■□□□□ 0.19
RTN4-207ENST00000402434 MVKQ03426 396 aa16.21■□□□□ 0.19
RTN4-207ENST00000402434 OR8B8Q15620 311 aa16.21■□□□□ 0.19
RTN4-207ENST00000402434 AVPI1Q5T686 147 aa16.21■□□□□ 0.19
RTN4-207ENST00000402434 APOL4Q9BPW4 351 aa16.21■□□□□ 0.19
RTN4-207ENST00000402434 IKZF2Q9UKS7 526 aa16.21■□□□□ 0.19
RTN4-207ENST00000402434 A0A0U1RQV5 110 aa16.2■□□□□ 0.18
RTN4-207ENST00000402434 A0A1W2PQL4 384 aaPredicted RBP16.2■□□□□ 0.18
RTN4-207ENST00000402434 A8MV72 311 aaPredicted RBP16.2■□□□□ 0.18
RTN4-207ENST00000402434 INAFM1C9JVW0 142 aa16.2■□□□□ 0.18
RTN4-207ENST00000402434 IFNL4K9M1U5 179 aa16.2■□□□□ 0.18
RTN4-207ENST00000402434 MPZL2O60487 215 aa16.2■□□□□ 0.18
RTN4-207ENST00000402434 SRSF10O75494 262 aaKnown RBP16.2■□□□□ 0.18
RTN4-207ENST00000402434 PTBP3O95758 552 aaKnown RBP16.2■□□□□ 0.18
RTN4-207ENST00000402434 CD200P41217 278 aa16.2■□□□□ 0.18
RTN4-207ENST00000402434 OR8G1Q15617 311 aa16.2■□□□□ 0.18
RTN4-207ENST00000402434 PEG10Q86TG7 708 aaKnown RBP16.2■□□□□ 0.18
RTN4-207ENST00000402434 ENTHD1Q8IYW4 607 aa16.2■□□□□ 0.18
RTN4-207ENST00000402434 PACRGLQ8N7B6 248 aa16.2■□□□□ 0.18
RTN4-207ENST00000402434 SIGLEC11Q96RL6 698 aa16.2■□□□□ 0.18
RTN4-207ENST00000402434 TTTY10Q9BZA0 68 aa16.2■□□□□ 0.18
RTN4-207ENST00000402434 YAE1D1Q9NRH1 226 aa16.2■□□□□ 0.18
RTN4-207ENST00000402434 MRM2Q9UI43 246 aaKnown RBP16.2■□□□□ 0.18
RTN4-207ENST00000402434 APOL3O95236 402 aa16.19■□□□□ 0.18
RTN4-207ENST00000402434 PNPP00491 289 aa16.19■□□□□ 0.18
RTN4-207ENST00000402434 HOXB4P17483 251 aaPredicted RBP16.19■□□□□ 0.18
RTN4-207ENST00000402434 ATP6V1E1P36543 226 aa16.19■□□□□ 0.18
RTN4-207ENST00000402434 HNRNPA0Q13151 305 aaKnown RBP16.19■□□□□ 0.18
RTN4-207ENST00000402434 LRRC36Q1X8D7 754 aa16.19■□□□□ 0.18
RTN4-207ENST00000402434 ZNF181Q2M3W8 571 aa16.19■□□□□ 0.18
RTN4-207ENST00000402434 GFOD2Q3B7J2 385 aa16.19■□□□□ 0.18
RTN4-207ENST00000402434 ZNF829Q3KNS6 432 aaPredicted RBP16.19■□□□□ 0.18
RTN4-207ENST00000402434 ZNF684Q5T5D7 378 aa16.19■□□□□ 0.18
RTN4-207ENST00000402434 LPCAT4Q643R3 524 aa16.19■□□□□ 0.18
RTN4-207ENST00000402434 SSX6Q7RTT6 188 aa16.19■□□□□ 0.18
RTN4-207ENST00000402434 GALNT4Q8N4A0 578 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms