RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 TMEM165Q9HC07 324 aa12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 DOCK11Q5JSL3 2073 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 FSHBP01225 129 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 WNT2P09544 360 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 SLC2A1P11166 492 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 IRF2P14316 349 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 EPHA1P21709 976 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 CA6P23280 308 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 PMELP40967 661 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 ZNF404Q494X3 552 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 ESCO2Q56NI9 601 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 FAHD1Q6P587 224 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 USP43Q70EL4 1123 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 SPATC1Q76KD6 591 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 PRSS45Q7RTY3 260 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 PARP8Q8N3A8 854 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 ZNF454Q8N9F8 522 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 OR56B2PQ8NGI1 322 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 OR52H1Q8NGJ2 320 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 OR11L1Q8NGX0 322 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 OTOSQ8NHW6 89 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 NANPQ8TBE9 248 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 ZMYND19Q96E35 227 aaPredicted RBP12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 PLEKHA8Q96JA3 519 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 OCEL1Q9H607 264 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 C7orf69Q9H7B7 122 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 PAPOLBQ9NRJ5 636 aaKnown RBP12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 KIF17Q9P2E2 1029 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 MIOXQ9UGB7 285 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 OPN4Q9UHM6 478 aa12.47□□□□□ -0.41
SMIM11A-203ENST00000399299 IGHV3-64DA0A0J9YX35 117 aa12.46□□□□□ -0.41
SMIM11A-203ENST00000399299 TIPRLO75663 272 aa12.46□□□□□ -0.41
SMIM11A-203ENST00000399299 ANXA2P07355 339 aaKnown RBP12.46□□□□□ -0.41
SMIM11A-203ENST00000399299 LYNP07948 512 aa12.46□□□□□ -0.41
SMIM11A-203ENST00000399299 RPS2P15880 293 aaKnown RBP12.46□□□□□ -0.41
SMIM11A-203ENST00000399299 ZNF12P17014 697 aa12.46□□□□□ -0.41
SMIM11A-203ENST00000399299 SLC2A5P22732 501 aa12.46□□□□□ -0.41
SMIM11A-203ENST00000399299 CFL1P23528 166 aaKnown RBP12.46□□□□□ -0.41
SMIM11A-203ENST00000399299 SEC61A1P61619 476 aaKnown RBP12.46□□□□□ -0.41
SMIM11A-203ENST00000399299 SRSF2Q01130 221 aaKnown RBP12.46□□□□□ -0.41
SMIM11A-203ENST00000399299 KLHL12Q53G59 568 aa12.46□□□□□ -0.41
SMIM11A-203ENST00000399299 CPOQ8IVL8 374 aa12.46□□□□□ -0.41
SMIM11A-203ENST00000399299 DEFB108BQ8NET1 73 aa12.46□□□□□ -0.41
SMIM11A-203ENST00000399299 OR5K1Q8NHB7 308 aa12.46□□□□□ -0.41
SMIM11A-203ENST00000399299 ZNF418Q8TF45 676 aaPredicted RBP12.46□□□□□ -0.41
SMIM11A-203ENST00000399299 ZFAND2BQ8WV99 257 aa12.46□□□□□ -0.41
SMIM11A-203ENST00000399299 AMELYQ99218 206 aa12.46□□□□□ -0.41
SMIM11A-203ENST00000399299 TMEM246Q9BRR3 403 aa12.46□□□□□ -0.41
SMIM11A-203ENST00000399299 FN3KRPQ9HA64 309 aa12.46□□□□□ -0.41
SMIM11A-203ENST00000399299 PPIAL4AQ9Y536 164 aa12.46□□□□□ -0.41
SMIM11A-203ENST00000399299 TENM1Q9UKZ4 2725 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 TRAPPC2LH3BP13 241 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 TBX1O43435 398 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 SELENOFO60613 162 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 FAM20BO75063 409 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 ZNF205O95201 554 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 H2BFMP0C1H6 154 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 ADRA2CP18825 462 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 DAPP51397 102 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 CRISP1P54107 249 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 ZNF121P58317 390 aaPredicted RBP12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 ESRRGP62508 458 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 FAM3AP98173 230 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 MZT1Q08AG7 82 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 MPPED2Q15777 294 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 ATP6AP1Q15904 470 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 TIGD6Q17RP2 521 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 PRAMEF6Q5VXH4 476 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 DCDC5Q6ZRR9 648 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 SLC16A9Q7RTY1 509 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 SEMA6DQ8NFY4 1073 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 NEIL1Q96FI4 390 aaPredicted RBP12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 DUS3LQ96G46 650 aaKnown RBP12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 REEP6Q96HR9 211 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 SSBP3Q9BWW4 388 aaPredicted RBP12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 RGCCQ9H4X1 137 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 NIPAL2Q9H841 368 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 MMP26Q9NRE1 261 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 RNF7Q9UBF6 113 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 OR5V1Q9UGF6 321 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 INSIG2Q9Y5U4 225 aa12.45□□□□□ -0.42
SMIM11A-203ENST00000399299 hCG_38984A0A1B0GV85 526 aa12.44□□□□□ -0.42
SMIM11A-203ENST00000399299 ANKRD30BLA7E2S9 258 aa12.44□□□□□ -0.42
SMIM11A-203ENST00000399299 PAX2Q02962 417 aa12.44□□□□□ -0.42
SMIM11A-203ENST00000399299 ZNF154Q13106 437 aa12.44□□□□□ -0.42
SMIM11A-203ENST00000399299 SNCBQ16143 134 aa12.44□□□□□ -0.42
SMIM11A-203ENST00000399299 SNAPC1Q16533 368 aa12.44□□□□□ -0.42
SMIM11A-203ENST00000399299 TMEM236Q5W0B7 351 aa12.44□□□□□ -0.42
SMIM11A-203ENST00000399299 FAM57BQ71RH2 274 aa12.44□□□□□ -0.42
SMIM11A-203ENST00000399299 NLRC3Q7RTR2 1065 aa12.44□□□□□ -0.42
SMIM11A-203ENST00000399299 BBS1Q8NFJ9 593 aa12.44□□□□□ -0.42
SMIM11A-203ENST00000399299 OR8B3Q8NGG8 313 aa12.44□□□□□ -0.42
SMIM11A-203ENST00000399299 THEM6Q8WUY1 208 aa12.44□□□□□ -0.42
SMIM11A-203ENST00000399299 SGK3Q96BR1 496 aa12.44□□□□□ -0.42
SMIM11A-203ENST00000399299 OR8B2Q96RD0 313 aa12.44□□□□□ -0.42
SMIM11A-203ENST00000399299 PRRG3Q9BZD7 231 aa12.44□□□□□ -0.42
SMIM11A-203ENST00000399299 YIPF3Q9GZM5 350 aa12.44□□□□□ -0.42
SMIM11A-203ENST00000399299 OR10A2Q9H208 303 aa12.44□□□□□ -0.42
SMIM11A-203ENST00000399299 UFSP2Q9NUQ7 469 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms