RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 SIP14410 1827 aa13.15□□□□□ -0.3
RPRD1A-202ENST00000399022 NYNRINQ9P2P1 1898 aaKnown RBP13.15□□□□□ -0.3
RPRD1A-202ENST00000399022 OGG1O15527 345 aa13.15□□□□□ -0.3
RPRD1A-202ENST00000399022 TMEM127O75204 238 aa13.15□□□□□ -0.3
RPRD1A-202ENST00000399022 OTX2P32243 289 aa13.15□□□□□ -0.3
RPRD1A-202ENST00000399022 DCXRQ7Z4W1 244 aa13.15□□□□□ -0.3
RPRD1A-202ENST00000399022 AMDHD2Q9Y303 409 aa13.15□□□□□ -0.3
RPRD1A-202ENST00000399022 ZNF236Q9UL36 1845 aa13.15□□□□□ -0.3
RPRD1A-202ENST00000399022 MPTX1A8MV57 137 aa13.15□□□□□ -0.3
RPRD1A-202ENST00000399022 TCAPO15273 167 aa13.15□□□□□ -0.3
RPRD1A-202ENST00000399022 ADAP1O75689 374 aa13.15□□□□□ -0.3
RPRD1A-202ENST00000399022 PAX6P26367 422 aa13.15□□□□□ -0.3
RPRD1A-202ENST00000399022 FCRL6Q6DN72 434 aa13.15□□□□□ -0.3
RPRD1A-202ENST00000399022 TMEM92Q6UXU6 159 aa13.15□□□□□ -0.3
RPRD1A-202ENST00000399022 EXD3Q8N9H8 876 aa13.15□□□□□ -0.3
RPRD1A-202ENST00000399022 CMBLQ96DG6 245 aa13.15□□□□□ -0.3
RPRD1A-202ENST00000399022 CABLES2Q9BTV7 478 aa13.15□□□□□ -0.3
RPRD1A-202ENST00000399022 RAB33BQ9H082 229 aa13.15□□□□□ -0.3
RPRD1A-202ENST00000399022 AK3Q9UIJ7 227 aa13.15□□□□□ -0.3
RPRD1A-202ENST00000399022 PRAMEF27A3QJZ7 478 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 A6NIZ1 184 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 G3V3Y1 287 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 ST8SIA3O43173 380 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 ZNF749O43361 778 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 RAP1BP61224 184 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 HFEQ30201 348 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 CHRDL2Q6WN34 429 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 FAM219AQ8IW50 185 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 OR2L13Q8N349 312 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 CCDC54Q8NEL0 328 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 CPNE4Q96A23 557 aaPredicted RBP13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 RBMXL1Q96E39 390 aaKnown RBP13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 POM121Q96HA1 1249 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 LRFN5Q96NI6 719 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 KCNS2Q9ULS6 477 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 PPP5D1E7EU14 171 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 YIF1AO95070 293 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 ZNF74Q16587 644 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 TMEM41BQ5BJD5 291 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 RBMS3Q6XE24 437 aaKnown RBP13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 ZFP62Q8NB50 900 aaPredicted RBP13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 NRIP2Q9BQI9 281 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 ZNF160Q9HCG1 818 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 ACAD8Q9UKU7 415 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 SRPK3Q9UPE1 567 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 CASP8AP2Q9UKL3 1982 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 SULT2B1O00204 365 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 CT62P0C5K7 136 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 PLGLB1Q02325 96 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 IKZF1Q13422 519 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 PRSS35Q8N3Z0 413 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 OR10A2Q9H208 303 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 FAM60AQ9NP50 221 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 LPAR3Q9UBY5 353 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 TNFSF18Q9UNG2 199 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 COA3Q9Y2R0 106 aaPredicted RBP13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 A0A1W2PPE2 198 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 PHF1O43189 567 aaPredicted RBP13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 NUDT21O43809 227 aaKnown RBP13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 SERPINE2P07093 398 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 ZNF728P0DKX0 622 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 TFF2Q03403 129 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 NECAP1Q8NC96 275 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 OR51A4Q8NGJ6 313 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 HSD17B8Q92506 261 aa13.14□□□□□ -0.31
RPRD1A-202ENST00000399022 CST4P01036 141 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 DAP3P51398 398 aaKnown RBP13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 TESK1Q15569 626 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 CST9LP1Q5W188 147 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 FAM57BQ71RH2 274 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 RNF128Q8TEB7 428 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 EMC6Q9BV81 110 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 FOXQ1Q9C009 403 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 HEXA-AS1Q9H8Q6 139 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 A0A0G2JMZ2 1700 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 ALOX12BO75342 701 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 NXPH3O95157 252 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 F10P00742 488 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 HPNP05981 417 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 CRHP06850 196 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 FGF7P21781 194 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 CD27P26842 260 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 GSK3AP49840 483 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 ZIC1Q15915 447 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 NT5CQ8TCD5 201 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 RGP1Q92546 391 aaPredicted RBP13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 SAT2Q96F10 170 aaPredicted RBP13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 OR6C1Q96RD1 312 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 KLHL13Q9P2N7 655 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 GNG13Q9P2W3 67 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 PTRH2Q9Y3E5 179 aaKnown RBP13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 TIMM8BQ9Y5J9 83 aaPredicted RBP13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 TRAV36DV7A0A075B6V5 113 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 CEBPZOSA8MTT3 80 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 SCRG1O75711 98 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 DCAF7P61962 342 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 SLC17A1Q14916 467 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 TAF9Q16594 264 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 DMRTC1Q5HYR2 192 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 CMTM1Q8IZ96 169 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms