RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 BPNT1O95861 308 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 LCATP04180 440 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 DAOP14920 347 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 OPRM1P35372 400 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 AFF3P51826 1226 aaKnown RBP9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 TMEM176BQ3YBM2 270 aaPredicted RBP9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 IGSF11Q5DX21 431 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 RAET1LQ5VY80 246 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 C11orf40Q8WZ69 217 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 SLC25A28Q96A46 364 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 PIK3IP1Q96FE7 263 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 KIRREL1Q96J84 757 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 ZCCHC4Q9H5U6 513 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 METTL12A8MUP2 240 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 SHISA8B8ZZ34 492 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 COL9A1P20849 921 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 PTAFRP25105 342 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 MTCP1P56278 107 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 FABP9Q0Z7S8 132 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 KIAA0141Q14154 515 aaPredicted RBP9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 AKR1C8PQ5T2L2 129 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 CPEB2Q7Z5Q1 589 aaKnown RBP9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 TMEM156Q8N614 296 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 DTWD2Q8NBA8 298 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 UNKLQ9H9P5 680 aaKnown RBP9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 CENPFP49454 3210 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 MBTPS2O43462 519 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 TNFSF14O43557 240 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 LYPD3O95274 346 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 S100A8P05109 93 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 FABP1P07148 127 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 ZNF16P17020 682 aaPredicted RBP9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 TBPP20226 339 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 GPR3P46089 330 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 UBE2KP61086 200 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 ZNF345Q14585 488 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 NR0B2Q15466 257 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 PDZD11Q5EBL8 140 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 TMEM240Q5SV17 173 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 CLEC9AQ6UXN8 241 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 C16orf47Q6ZP98 133 aaPredicted RBP9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 RXFP4Q8TDU9 374 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 SECTM1Q8WVN6 248 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 FBXO17Q96EF6 278 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 BORCS8Q96FH0 119 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 ARHGAP5-AS1Q96IT6 56 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 ARL5BQ96KC2 179 aa9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 NXT1Q9UKK6 140 aaKnown RBP9.95□□□□□ -0.82
CSGALNACT1-202ENST00000397998 A0A1W2PNR3 127 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 A0A1W2PPC1 479 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 SMIM10L1P0DMW3 83 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 CDAP32320 146 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 NKX6-1P78426 367 aaPredicted RBP9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 SNIP1Q8TAD8 396 aaKnown RBP9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 ROBO4Q8WZ75 1007 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 SMIM10Q96HG1 83 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 TRBV5-7A0A0A0MS05 114 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 FAM221AA4D161 298 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 OR6C76A6NM76 312 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 DUX1O43812 170 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 LMX1BO60663 402 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 NME1P15531 152 aaKnown RBP9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 DRD1P21728 446 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 TFF2Q03403 129 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 C17orf67Q0P5P2 114 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 MGAT2Q10469 447 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 SKP2Q13309 424 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 HMGN3Q15651 99 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 SP6Q3SY56 376 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 MOB3CQ70IA8 216 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 PLXDC1Q8IUK5 500 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 ZNF695Q8IW36 515 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 ZNF561Q8N587 486 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 ARRDC1Q8N5I2 433 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 NMNAT2Q9BZQ4 307 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 MMACHCQ9Y4U1 282 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 PCDHGA1Q9Y5H4 931 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 SCN8AQ9UQD0 1980 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 IGKV1D-42A0A075B6H8 117 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 TAAR5O14804 337 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 CD37P11049 281 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 SLC25A4P12235 298 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 ZNF84P51523 738 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 DHODHQ02127 395 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 CLEC18BQ6UXF7 455 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 FAM24BQ8N5W8 94 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 SLC30A7Q8NEW0 376 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 OR5L1Q8NGL2 311 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 RSRP1Q9BUV0 290 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 CTSFQ9UBX1 484 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 SLC7A11Q9UPY5 501 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 PLXND1Q9Y4D7 1925 aa9.94□□□□□ -0.82
CSGALNACT1-202ENST00000397998 TRAV14DV4A0A0A6YYC5 116 aa9.93□□□□□ -0.82
CSGALNACT1-202ENST00000397998 C17orf51A8MQB3 221 aa9.93□□□□□ -0.82
CSGALNACT1-202ENST00000397998 SOCS1O15524 211 aa9.93□□□□□ -0.82
CSGALNACT1-202ENST00000397998 JMJD7P0C870 316 aa9.93□□□□□ -0.82
CSGALNACT1-202ENST00000397998 ZNF728P0DKX0 622 aa9.93□□□□□ -0.82
CSGALNACT1-202ENST00000397998 EPHA1P21709 976 aa9.93□□□□□ -0.82
CSGALNACT1-202ENST00000397998 CSNK1A1P48729 337 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms