RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 RTL6Q6ICC9 239 aa16.95■□□□□ 0.3
PDLIM2-204ENST00000397760 KCTD18Q6PI47 426 aaPredicted RBP16.95■□□□□ 0.3
PDLIM2-204ENST00000397760 STAC2Q6ZMT1 411 aa16.95■□□□□ 0.3
PDLIM2-204ENST00000397760 DNM1P46Q6ZS02 220 aa16.95■□□□□ 0.3
PDLIM2-204ENST00000397760 OR2AJ1Q8NGZ0 328 aa16.95■□□□□ 0.3
PDLIM2-204ENST00000397760 OR52N5Q8NH56 324 aa16.95■□□□□ 0.3
PDLIM2-204ENST00000397760 GIMAP1Q8WWP7 306 aa16.95■□□□□ 0.3
PDLIM2-204ENST00000397760 OR8B4Q96RC9 309 aa16.95■□□□□ 0.3
PDLIM2-204ENST00000397760 FOXB1Q99853 325 aa16.95■□□□□ 0.3
PDLIM2-204ENST00000397760 C20orf85Q9H1P6 137 aa16.95■□□□□ 0.3
PDLIM2-204ENST00000397760 LIN7BQ9HAP6 207 aa16.95■□□□□ 0.3
PDLIM2-204ENST00000397760 SCP2D1Q9UJQ7 156 aa16.95■□□□□ 0.3
PDLIM2-204ENST00000397760 FBXL3Q9UKT7 428 aa16.95■□□□□ 0.3
PDLIM2-204ENST00000397760 MGAT4AQ9UM21 535 aa16.95■□□□□ 0.3
PDLIM2-204ENST00000397760 EMC9Q9Y3B6 208 aa16.95■□□□□ 0.3
PDLIM2-204ENST00000397760 MBD3L4A6NDZ8 208 aaPredicted RBP16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 MBD3L3A6NE82 208 aaPredicted RBP16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 MBD3L5A6NJ08 208 aaPredicted RBP16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 ACOD1A6NK06 481 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 TTLL8A6PVC2 850 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 ZNF587BE7ETH6 402 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 SMLR1H3BR10 107 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 RPL36A-HNRNPH2H7BZ11 118 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 ERVH48-1M5A8F1 160 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 CCR6P51684 374 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 ART1P52961 327 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 LY6DQ14210 128 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 C1orf185Q5T7R7 199 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 HES5Q5TA89 166 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 ZBTB37Q5TC79 503 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 METTL11BQ5VVY1 283 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 FDX2Q6P4F2 183 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 MBD3L2Q8NHZ7 208 aaPredicted RBP16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 ANGPTL6Q8NI99 470 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 ST7LQ8TDW4 575 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 ZNF416Q9BWM5 594 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 C1orf198Q9H425 327 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 ELOVL3Q9HB03 270 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 HRASLSQ9HDD0 168 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 TMEM38BQ9NVV0 291 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 ASH2LQ9UBL3 628 aa16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 ELF5Q9UKW6 265 aaPredicted RBP16.94■□□□□ 0.3
PDLIM2-204ENST00000397760 TRBV5-7A0A0A0MS05 114 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 A0A1B0GUH1 482 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 ZNF254O75437 659 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 MT-ND4P03905 459 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 OR3A2P47893 321 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 PTH2RP49190 550 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 ROM1Q03395 351 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 ENDOGQ14249 297 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 SEZ6L2Q6UXD5 910 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 SEM1Q6ZVN7 128 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 PRSS45Q7RTY3 260 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 KRT77Q7Z794 578 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 ZNF679Q8IYX0 411 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 LRRC18Q8N456 261 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 COMMD4Q9H0A8 199 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 AUNIPQ9H7T9 357 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 FRRS1LQ9P0K9 344 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 OR5V1Q9UGF6 321 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 PRSS50Q9UI38 385 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 GDF2Q9UK05 429 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 FOXJ3Q9UPW0 622 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 FAM215AQ9Y5M1 114 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 ANKRD20A5PA0PJZ0 165 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 PRRG2O14669 202 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 RPP14O95059 124 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 WNT11O96014 354 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 HOXD4P09016 255 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 KIR2DL2P43627 348 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 MECP2P51608 486 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 PER3P56645 1201 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 SNRPD2P62316 118 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 STK11Q15831 433 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 ST3GAL2Q16842 350 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 FAM27BQ5VT28 67 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 ZNF433Q8N7K0 673 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 CNEP1R1Q8N9A8 125 aa16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 PRRC2CQ9Y520 2896 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-204ENST00000397760 OR4C45A6NMZ5 311 aa16.92■□□□□ 0.3
PDLIM2-204ENST00000397760 B4GALT1P15291 398 aa16.92■□□□□ 0.3
PDLIM2-204ENST00000397760 TMEM69Q5SWH9 247 aa16.92■□□□□ 0.3
PDLIM2-204ENST00000397760 FBXW9Q5XUX1 488 aa16.92■□□□□ 0.3
PDLIM2-204ENST00000397760 C3P1Q6ZMU1 363 aa16.92■□□□□ 0.3
PDLIM2-204ENST00000397760 CFAP77Q6ZQR2 320 aa16.92■□□□□ 0.3
PDLIM2-204ENST00000397760 LRRTM1Q86UE6 522 aa16.92■□□□□ 0.3
PDLIM2-204ENST00000397760 OR52I2Q8NH67 350 aa16.92■□□□□ 0.3
PDLIM2-204ENST00000397760 SYNPRQ8TBG9 265 aa16.92■□□□□ 0.3
PDLIM2-204ENST00000397760 RNF133Q8WVZ7 376 aa16.92■□□□□ 0.3
PDLIM2-204ENST00000397760 SLAMF6Q96DU3 332 aa16.92■□□□□ 0.3
PDLIM2-204ENST00000397760 CENPMQ9NSP4 180 aa16.92■□□□□ 0.3
PDLIM2-204ENST00000397760 SLC23A1Q9UHI7 598 aa16.92■□□□□ 0.3
PDLIM2-204ENST00000397760 DSPP15924 2871 aaKnown RBP16.92■□□□□ 0.3
PDLIM2-204ENST00000397760 RER1O15258 196 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 FOXG1P55316 489 aaPredicted RBP16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 ARF1P84077 181 aaKnown RBP16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 FOXF2Q12947 444 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 RNASE12Q5GAN4 147 aaKnown RBP16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 C9orf135Q5VTT2 229 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 ABHD12BQ7Z5M8 362 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms