RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 IDO2Q6ZQW0 420 aa13.72□□□□□ -0.21
LSS-202ENST00000397728 OR13G1Q8NGZ3 307 aa13.72□□□□□ -0.21
LSS-202ENST00000397728 MMP28Q9H239 520 aa13.72□□□□□ -0.21
LSS-202ENST00000397728 RGCCQ9H4X1 137 aa13.72□□□□□ -0.21
LSS-202ENST00000397728 ZFP57Q9NU63 452 aa13.72□□□□□ -0.21
LSS-202ENST00000397728 ZNF646O15015 1829 aaPredicted RBP13.71□□□□□ -0.21
LSS-202ENST00000397728 SPTBN1Q01082 2364 aaKnown RBP13.71□□□□□ -0.21
LSS-202ENST00000397728 KLF3P57682 345 aaPredicted RBP13.71□□□□□ -0.21
LSS-202ENST00000397728 MSMO1Q15800 293 aa13.71□□□□□ -0.21
LSS-202ENST00000397728 OR10K2Q6IF99 312 aa13.71□□□□□ -0.21
LSS-202ENST00000397728 TMEM68Q96MH6 324 aa13.71□□□□□ -0.21
LSS-202ENST00000397728 ARL6Q9H0F7 186 aa13.71□□□□□ -0.21
LSS-202ENST00000397728 A6NHS1 94 aa13.71□□□□□ -0.21
LSS-202ENST00000397728 AQP7P3A6NL99 342 aa13.71□□□□□ -0.21
LSS-202ENST00000397728 ANGPTL7O43827 346 aa13.71□□□□□ -0.21
LSS-202ENST00000397728 WDR1O75083 606 aa13.71□□□□□ -0.21
LSS-202ENST00000397728 ZNF136P52737 540 aa13.71□□□□□ -0.21
LSS-202ENST00000397728 HMGA2P52926 109 aa13.71□□□□□ -0.21
LSS-202ENST00000397728 AGAP6Q5VW22 663 aa13.71□□□□□ -0.21
LSS-202ENST00000397728 PLXDC2Q6UX71 529 aa13.71□□□□□ -0.21
LSS-202ENST00000397728 ELMOD3Q96FG2 381 aa13.71□□□□□ -0.21
LSS-202ENST00000397728 PLK3Q9H4B4 646 aa13.71□□□□□ -0.21
LSS-202ENST00000397728 CPNE5Q9HCH3 593 aa13.71□□□□□ -0.21
LSS-202ENST00000397728 TMEFF2Q9UIK5 374 aaPredicted RBP13.71□□□□□ -0.21
LSS-202ENST00000397728 KIR2DS1A0A191URI9 304 aa13.71□□□□□ -0.22
LSS-202ENST00000397728 CDX4O14627 284 aaPredicted RBP13.71□□□□□ -0.22
LSS-202ENST00000397728 SMIM10L1P0DMW3 83 aa13.71□□□□□ -0.22
LSS-202ENST00000397728 KIR2DS4P43632 304 aa13.71□□□□□ -0.22
LSS-202ENST00000397728 KIR2DS1Q14954 304 aa13.71□□□□□ -0.22
LSS-202ENST00000397728 METTL11BQ5VVY1 283 aa13.71□□□□□ -0.22
LSS-202ENST00000397728 SLC38A9Q8NBW4 561 aa13.71□□□□□ -0.22
LSS-202ENST00000397728 SMIM10Q96HG1 83 aa13.71□□□□□ -0.22
LSS-202ENST00000397728 PRSS12P56730 875 aa13.71□□□□□ -0.22
LSS-202ENST00000397728 CYCSP99999 105 aaKnown RBP13.71□□□□□ -0.22
LSS-202ENST00000397728 PLPPR5Q32ZL2 321 aa13.71□□□□□ -0.22
LSS-202ENST00000397728 C12orf73Q69YU5 71 aa13.71□□□□□ -0.22
LSS-202ENST00000397728 TSEN54Q7Z6J9 526 aaKnown RBP13.71□□□□□ -0.22
LSS-202ENST00000397728 PARP16Q8N5Y8 322 aa13.71□□□□□ -0.22
LSS-202ENST00000397728 DVL3Q92997 716 aaPredicted RBP13.71□□□□□ -0.22
LSS-202ENST00000397728 ANGPTL4Q9BY76 406 aa13.71□□□□□ -0.22
LSS-202ENST00000397728 SC5DO75845 299 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 IFNA7P01567 189 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 HLA-AP01891 365 aaKnown RBP13.7□□□□□ -0.22
LSS-202ENST00000397728 RPS19P39019 145 aaKnown RBP13.7□□□□□ -0.22
LSS-202ENST00000397728 CDK5Q00535 292 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 FGL1Q08830 312 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 HFEQ30201 348 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 FN3KRPQ9HA64 309 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 POLEQ07864 2286 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 PATJQ8NI35 1801 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 UPK1BO75841 260 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 EPPINO95925 133 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 RAB31Q13636 194 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 KHDC1LQ5JSQ8 128 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 C1orf185Q5T7R7 199 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 STX12Q86Y82 276 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 NTMQ9P121 344 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 H3BMH7 237 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 M0QYG6 137 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 M0R233 179 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 TSPAN2O60636 221 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 DUSP1P28562 367 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 MPGP29372 298 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 GMPPAQ96IJ6 420 aaPredicted RBP13.7□□□□□ -0.22
LSS-202ENST00000397728 RNF167Q9H6Y7 350 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 UBTD1Q9HAC8 227 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 FGF20Q9NP95 211 aaPredicted RBP13.7□□□□□ -0.22
LSS-202ENST00000397728 ST3GAL6Q9Y274 331 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 GREB1Q4ZG55 1949 aa13.7□□□□□ -0.22
LSS-202ENST00000397728 PMS2P2O95744 297 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 ZNF728P0DKX0 622 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 LYPD4Q6UWN0 246 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 TRMT61AQ96FX7 289 aaKnown RBP13.69□□□□□ -0.22
LSS-202ENST00000397728 HAO2Q9NYQ3 351 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 RAXQ9Y2V3 346 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 TRIM64BA6NI03 449 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 SPRY1O43609 319 aaPredicted RBP13.69□□□□□ -0.22
LSS-202ENST00000397728 SULT1B1O43704 296 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 PMP2P02689 132 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 ZNF17P17021 662 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 PPP1CBP62140 327 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 GNG3P63215 75 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 TFAP2EQ6VUC0 442 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 OR2T35Q8NGX2 323 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 OR10J5Q8NHC4 309 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 PP6455Q8WZ26 134 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 CHRNA10Q9GZZ6 450 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 NUBP2Q9Y5Y2 271 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 PTTG1O95997 202 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 FUT6P51993 359 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 BEST4Q8NFU0 473 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 C7orf50Q9BRJ6 194 aaKnown RBP13.69□□□□□ -0.22
LSS-202ENST00000397728 RDH8Q9NYR8 311 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 A0A0G2JMP0 313 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 C1QCP02747 245 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 GLAP06280 429 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 HIKESHIQ53FT3 197 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 FBXW9Q5XUX1 488 aa13.69□□□□□ -0.22
LSS-202ENST00000397728 CCDC71Q8IV32 467 aaPredicted RBP13.69□□□□□ -0.22
LSS-202ENST00000397728 ZNF441Q8N8Z8 693 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms