RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 STACQ99469 402 aa5.73□□□□□ -1.49
SMCO1-201ENST00000397537 PFDN5Q99471 154 aa5.73□□□□□ -1.49
SMCO1-201ENST00000397537 NIPSNAP1Q9BPW8 284 aa5.73□□□□□ -1.49
SMCO1-201ENST00000397537 SLC35A5Q9BS91 424 aa5.73□□□□□ -1.49
SMCO1-201ENST00000397537 CWH43Q9H720 699 aa5.73□□□□□ -1.49
SMCO1-201ENST00000397537 MCUBQ9NWR8 336 aa5.73□□□□□ -1.49
SMCO1-201ENST00000397537 TREM2Q9NZC2 230 aa5.73□□□□□ -1.49
SMCO1-201ENST00000397537 VAPAQ9P0L0 249 aa5.73□□□□□ -1.49
SMCO1-201ENST00000397537 ALG5Q9Y673 324 aa5.73□□□□□ -1.49
SMCO1-201ENST00000397537 DOCK3Q8IZD9 2030 aa5.73□□□□□ -1.49
SMCO1-201ENST00000397537 ZNF292O60281 2723 aa5.73□□□□□ -1.49
SMCO1-201ENST00000397537 ANKRD20A5PA0PJZ0 165 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 ISPDA4D126 451 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 OR5H15A6NDH6 313 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 PHYHO14832 338 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 ARPC5O15511 151 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 PRKYO43930 277 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 ALOX12BO75342 701 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 LYPD3O95274 346 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 ANGPTL1O95841 491 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 ZNF806P0C7X5 589 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 NHLRC4P0CG21 123 aaPredicted RBP5.72□□□□□ -1.49
SMCO1-201ENST00000397537 JUNBP17275 347 aaPredicted RBP5.72□□□□□ -1.49
SMCO1-201ENST00000397537 CSNK2A2P19784 350 aaPredicted RBP5.72□□□□□ -1.49
SMCO1-201ENST00000397537 EDNRAP25101 427 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 CCR7P32248 378 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 NR4A2P43354 598 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 UGT2B15P54855 530 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 SEC61A1P61619 476 aaKnown RBP5.72□□□□□ -1.49
SMCO1-201ENST00000397537 ELAVL2Q12926 359 aaKnown RBP5.72□□□□□ -1.49
SMCO1-201ENST00000397537 SRSF6Q13247 344 aaKnown RBP5.72□□□□□ -1.49
SMCO1-201ENST00000397537 ZFP69Q49AA0 526 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 SAXO2Q658L1 398 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 IZUMO2Q6UXV1 221 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 ADAMTSL5Q6ZMM2 481 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 Q6ZT83 130 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 FBXO16Q8IX29 292 aaPredicted RBP5.72□□□□□ -1.49
SMCO1-201ENST00000397537 WDSUB1Q8N9V3 476 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 CCDC54Q8NEL0 328 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 TMBIM1Q969X1 311 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 CABLES2Q9BTV7 478 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 MED18Q9BUE0 208 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 PCBD2Q9H0N5 130 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 UBE2ZQ9H832 354 aaPredicted RBP5.72□□□□□ -1.49
SMCO1-201ENST00000397537 RDH14Q9HBH5 336 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 HMG20AQ9NP66 347 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 UBE2TQ9NPD8 197 aaPredicted RBP5.72□□□□□ -1.49
SMCO1-201ENST00000397537 TMEM45AQ9NWC5 275 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 CHD7Q9P2D1 2997 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 MLXQ9UH92 298 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 AP4S1Q9Y587 144 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 FAM186AA6NE01 2351 aa5.72□□□□□ -1.49
SMCO1-201ENST00000397537 CENPVL1A0A0U1RR11 272 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 A0A1B0GTH9 108 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 A0A1B0GU03 582 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 SEC14L6B5MCN3 397 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 C21orf140B9A014 251 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 KCNK1O00180 336 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 PRKNO60260 465 aaPredicted RBP5.71□□□□□ -1.49
SMCO1-201ENST00000397537 UGT1A9O60656 530 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 CLIC3O95833 236 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 HBE1P02100 147 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 TRAPPC2P0DI81 140 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 TRAPPC2BP0DI82 140 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 CD1EP15812 388 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 PAX6P26367 422 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 SSTR2P30874 369 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 SAA4P35542 130 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 CYB561P49447 251 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 SRP9P49458 86 aaKnown RBP5.71□□□□□ -1.49
SMCO1-201ENST00000397537 CDH11P55287 796 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 RPL31P62899 125 aaKnown RBP5.71□□□□□ -1.49
SMCO1-201ENST00000397537 RPL8P62917 257 aaKnown RBP5.71□□□□□ -1.49
SMCO1-201ENST00000397537 CD300CQ08708 224 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 EIF2B1Q14232 305 aaKnown RBP5.71□□□□□ -1.49
SMCO1-201ENST00000397537 SLC1A5Q15758 541 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 SPIN3Q5JUX0 258 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 ZNF544Q6NX49 715 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 LYG2Q86SG7 212 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 PHF13Q86YI8 300 aaPredicted RBP5.71□□□□□ -1.49
SMCO1-201ENST00000397537 C4orf33Q8N1A6 199 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 MMGT1Q8N4V1 131 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 PRELID2Q8N945 189 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 OR1M1Q8NGA1 313 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 OR5L1Q8NGL2 311 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 OR9A4Q8NGU2 314 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 GATAD1Q8WUU5 269 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 NDRG1Q92597 394 aaKnown RBP5.71□□□□□ -1.49
SMCO1-201ENST00000397537 NKX3-1Q99801 234 aaPredicted RBP5.71□□□□□ -1.49
SMCO1-201ENST00000397537 HOPXQ9BPY8 73 aaPredicted RBP5.71□□□□□ -1.49
SMCO1-201ENST00000397537 YTHDF1Q9BYJ9 559 aaKnown RBP5.71□□□□□ -1.49
SMCO1-201ENST00000397537 ULBP1Q9BZM6 244 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 REEP4Q9H6H4 257 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 DDX31Q9H8H2 851 aaKnown RBP5.71□□□□□ -1.49
SMCO1-201ENST00000397537 UGT1A7Q9HAW7 530 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 UGT1A8Q9HAW9 530 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 FBXO8Q9NRD0 319 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 VNN3Q9NY84 501 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 TMEM9Q9P0T7 183 aa5.71□□□□□ -1.49
SMCO1-201ENST00000397537 SMPXQ9UHP9 88 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms