RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 WFIKKN1Q96NZ8 548 aa18.31■□□□□ 0.52
CPNE1-204ENST00000397443 POFUT1Q9H488 388 aa18.31■□□□□ 0.52
CPNE1-204ENST00000397443 CRNNQ9UBG3 495 aaPredicted RBP18.31■□□□□ 0.52
CPNE1-204ENST00000397443 EIF3KQ9UBQ5 218 aaKnown RBP18.31■□□□□ 0.52
CPNE1-204ENST00000397443 FLNCQ14315 2725 aa18.31■□□□□ 0.52
CPNE1-204ENST00000397443 UCHL1P09936 223 aa18.31■□□□□ 0.52
CPNE1-204ENST00000397443 EPXP11678 715 aa18.31■□□□□ 0.52
CPNE1-204ENST00000397443 MYL9P24844 172 aa18.31■□□□□ 0.52
CPNE1-204ENST00000397443 MAPK3P27361 379 aaPredicted RBP18.31■□□□□ 0.52
CPNE1-204ENST00000397443 GNALP38405 381 aa18.31■□□□□ 0.52
CPNE1-204ENST00000397443 RPS19P39019 145 aaKnown RBP18.31■□□□□ 0.52
CPNE1-204ENST00000397443 CAV3P56539 151 aa18.31■□□□□ 0.52
CPNE1-204ENST00000397443 HLXQ14774 488 aaPredicted RBP18.31■□□□□ 0.52
CPNE1-204ENST00000397443 PAMR1Q6UXH9 720 aa18.31■□□□□ 0.52
CPNE1-204ENST00000397443 DOK3Q7L591 496 aa18.31■□□□□ 0.52
CPNE1-204ENST00000397443 PLEKHA1Q9HB21 404 aa18.31■□□□□ 0.52
CPNE1-204ENST00000397443 ARL6IP5O75915 188 aa18.3■□□□□ 0.52
CPNE1-204ENST00000397443 NCR1O76036 304 aa18.3■□□□□ 0.52
CPNE1-204ENST00000397443 CD2P06729 351 aa18.3■□□□□ 0.52
CPNE1-204ENST00000397443 THBDP07204 575 aa18.3■□□□□ 0.52
CPNE1-204ENST00000397443 CALCRP30988 508 aa18.3■□□□□ 0.52
CPNE1-204ENST00000397443 ERVS71-1P61550 626 aa18.3■□□□□ 0.52
CPNE1-204ENST00000397443 ADAT3Q96EY9 351 aaPredicted RBP18.3■□□□□ 0.52
CPNE1-204ENST00000397443 TRAV8-7A0A075B6U6 113 aa18.29■□□□□ 0.52
CPNE1-204ENST00000397443 IGHV2OR16-5A0A0B4J2B6 119 aa18.29■□□□□ 0.52
CPNE1-204ENST00000397443 SRMP19623 302 aa18.29■□□□□ 0.52
CPNE1-204ENST00000397443 MALLQ13021 153 aa18.29■□□□□ 0.52
CPNE1-204ENST00000397443 FBXL19-AS1Q494R0 122 aa18.29■□□□□ 0.52
CPNE1-204ENST00000397443 DMRTC1Q5HYR2 192 aa18.29■□□□□ 0.52
CPNE1-204ENST00000397443 LINC01560Q8TB33 94 aa18.29■□□□□ 0.52
CPNE1-204ENST00000397443 ITLN2Q8WWU7 325 aaPredicted RBP18.29■□□□□ 0.52
CPNE1-204ENST00000397443 ZNF275Q9NSD4 429 aaPredicted RBP18.29■□□□□ 0.52
CPNE1-204ENST00000397443 TAS2R4Q9NYW5 299 aa18.29■□□□□ 0.52
CPNE1-204ENST00000397443 TRBV5-7A0A0A0MS05 114 aa18.29■□□□□ 0.52
CPNE1-204ENST00000397443 XRCC2O43543 280 aa18.29■□□□□ 0.52
CPNE1-204ENST00000397443 SMPD2O60906 423 aa18.29■□□□□ 0.52
CPNE1-204ENST00000397443 ZNF20P17024 532 aa18.29■□□□□ 0.52
CPNE1-204ENST00000397443 NAAAQ02083 359 aa18.29■□□□□ 0.52
CPNE1-204ENST00000397443 GK2Q14410 553 aaPredicted RBP18.29■□□□□ 0.52
CPNE1-204ENST00000397443 SEZ6L2Q6UXD5 910 aa18.29■□□□□ 0.52
CPNE1-204ENST00000397443 LRRC46Q96FV0 321 aa18.29■□□□□ 0.52
CPNE1-204ENST00000397443 TCF7L1Q9HCS4 588 aa18.29■□□□□ 0.52
CPNE1-204ENST00000397443 PIGLQ9Y2B2 252 aa18.29■□□□□ 0.52
CPNE1-204ENST00000397443 ANKHD1Q8IWZ3 2542 aaKnown RBP18.28■□□□□ 0.52
CPNE1-204ENST00000397443 DHRS3O75911 302 aa18.28■□□□□ 0.52
CPNE1-204ENST00000397443 IGLV3-1P01715 115 aa18.28■□□□□ 0.52
CPNE1-204ENST00000397443 MAS1P04201 325 aa18.28■□□□□ 0.52
CPNE1-204ENST00000397443 ZNF35P13682 527 aa18.28■□□□□ 0.52
CPNE1-204ENST00000397443 FAHP16930 419 aa18.28■□□□□ 0.52
CPNE1-204ENST00000397443 CCL1P22362 96 aa18.28■□□□□ 0.52
CPNE1-204ENST00000397443 SPOCK1Q08629 439 aa18.28■□□□□ 0.52
CPNE1-204ENST00000397443 FAM169BQ8N8A8 192 aa18.28■□□□□ 0.52
CPNE1-204ENST00000397443 OR14K1Q8NGZ2 314 aa18.28■□□□□ 0.52
CPNE1-204ENST00000397443 DYNC2LI1Q8TCX1 351 aa18.28■□□□□ 0.52
CPNE1-204ENST00000397443 USB1Q9BQ65 265 aaKnown RBP18.28■□□□□ 0.52
CPNE1-204ENST00000397443 ACKR3P25106 362 aa18.27■□□□□ 0.52
CPNE1-204ENST00000397443 UCP2P55851 309 aa18.27■□□□□ 0.52
CPNE1-204ENST00000397443 OR10A3P58181 314 aa18.27■□□□□ 0.52
CPNE1-204ENST00000397443 PPP1CBP62140 327 aa18.27■□□□□ 0.52
CPNE1-204ENST00000397443 ASPHD2Q6ICH7 369 aa18.27■□□□□ 0.52
CPNE1-204ENST00000397443 MRPL21Q7Z2W9 205 aaKnown RBP18.27■□□□□ 0.52
CPNE1-204ENST00000397443 AKAP1Q92667 903 aaKnown RBP eCLIP18.27■□□□□ 0.52
CPNE1-204ENST00000397443 RADILQ96JH8 1075 aa18.27■□□□□ 0.52
CPNE1-204ENST00000397443 TBCCD1Q9NVR7 557 aa18.27■□□□□ 0.52
CPNE1-204ENST00000397443 AK6Q9Y3D8 172 aaKnown RBP18.27■□□□□ 0.52
CPNE1-204ENST00000397443 TRIM64BA6NI03 449 aa18.27■□□□□ 0.51
CPNE1-204ENST00000397443 MTRF1O75570 445 aaKnown RBP18.27■□□□□ 0.51
CPNE1-204ENST00000397443 CLDN14O95500 239 aa18.27■□□□□ 0.51
CPNE1-204ENST00000397443 GSK3AP49840 483 aa18.27■□□□□ 0.51
CPNE1-204ENST00000397443 FAM3AP98173 230 aa18.27■□□□□ 0.51
CPNE1-204ENST00000397443 PGAP1Q75T13 922 aa18.27■□□□□ 0.51
CPNE1-204ENST00000397443 OR1J1Q8NGS3 322 aa18.27■□□□□ 0.51
CPNE1-204ENST00000397443 OR2J1Q9GZK6 312 aa18.27■□□□□ 0.51
CPNE1-204ENST00000397443 RGCCQ9H4X1 137 aa18.27■□□□□ 0.51
CPNE1-204ENST00000397443 MOV10Q9HCE1 1003 aaKnown RBP18.27■□□□□ 0.51
CPNE1-204ENST00000397443 hCG_38984A0A1B0GV85 526 aa18.26■□□□□ 0.51
CPNE1-204ENST00000397443 CRYAAP02489 173 aa18.26■□□□□ 0.51
CPNE1-204ENST00000397443 MTNR1BP49286 362 aa18.26■□□□□ 0.51
CPNE1-204ENST00000397443 HNRNPA0Q13151 305 aaKnown RBP18.26■□□□□ 0.51
CPNE1-204ENST00000397443 PIAS4Q8N2W9 510 aaPredicted RBP18.26■□□□□ 0.51
CPNE1-204ENST00000397443 PLPP7Q8NBV4 271 aa18.26■□□□□ 0.51
CPNE1-204ENST00000397443 BHLHE23Q8NDY6 225 aa18.26■□□□□ 0.51
CPNE1-204ENST00000397443 DNAAF1Q8NEP3 725 aa18.26■□□□□ 0.51
CPNE1-204ENST00000397443 SEMA6DQ8NFY4 1073 aa18.26■□□□□ 0.51
CPNE1-204ENST00000397443 OR51A2Q8NGJ7 313 aa18.26■□□□□ 0.51
CPNE1-204ENST00000397443 OR5L1Q8NGL2 311 aa18.26■□□□□ 0.51
CPNE1-204ENST00000397443 OR13C9Q8NGT0 318 aa18.26■□□□□ 0.51
CPNE1-204ENST00000397443 PHYHIPQ92561 330 aa18.26■□□□□ 0.51
CPNE1-204ENST00000397443 NKX3-1Q99801 234 aaPredicted RBP18.26■□□□□ 0.51
CPNE1-204ENST00000397443 CKLFQ9UBR5 152 aa18.26■□□□□ 0.51
CPNE1-204ENST00000397443 V9GYS6 101 aa18.26■□□□□ 0.51
CPNE1-204ENST00000397443 IL1AP01583 271 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 RAF1P04049 648 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 PPP3CBP16298 524 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 TFF3Q07654 80 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 TNK1Q13470 666 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 CEP78Q5JTW2 689 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 XKRXQ6PP77 449 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 NR2C2APQ86WQ0 139 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 SLC25A40Q8TBP6 338 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms