RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 EGR3Q06889 387 aa21.52■■□□□ 1.04
TSPAN4-207ENST00000397411 SLC3A1Q07837 685 aa21.52■■□□□ 1.04
TSPAN4-207ENST00000397411 OR8G1Q15617 311 aa21.52■■□□□ 1.04
TSPAN4-207ENST00000397411 PRSS45Q7RTY3 260 aa21.52■■□□□ 1.04
TSPAN4-207ENST00000397411 ITLN1Q8WWA0 313 aa21.52■■□□□ 1.04
TSPAN4-207ENST00000397411 TIMD4Q96H15 378 aa21.52■■□□□ 1.04
TSPAN4-207ENST00000397411 OR2V2Q96R30 315 aa21.52■■□□□ 1.04
TSPAN4-207ENST00000397411 RGCCQ9H4X1 137 aa21.52■■□□□ 1.04
TSPAN4-207ENST00000397411 TEP1Q99973 2627 aaKnown RBP21.52■■□□□ 1.04
TSPAN4-207ENST00000397411 IGHV4-61A0A0C4DH41 118 aa21.51■■□□□ 1.03
TSPAN4-207ENST00000397411 ACOD1A6NK06 481 aa21.51■■□□□ 1.03
TSPAN4-207ENST00000397411 ANKRD30BLA7E2S9 258 aa21.51■■□□□ 1.03
TSPAN4-207ENST00000397411 CLDN25C9JDP6 229 aa21.51■■□□□ 1.03
TSPAN4-207ENST00000397411 H0YL77 283 aa21.51■■□□□ 1.03
TSPAN4-207ENST00000397411 HLA-DPB1P04440 258 aa21.51■■□□□ 1.03
TSPAN4-207ENST00000397411 CA6P23280 308 aa21.51■■□□□ 1.03
TSPAN4-207ENST00000397411 DCTDP32321 178 aa21.51■■□□□ 1.03
TSPAN4-207ENST00000397411 IL5RAQ01344 420 aa21.51■■□□□ 1.03
TSPAN4-207ENST00000397411 TTC23Q5W5X9 447 aa21.51■■□□□ 1.03
TSPAN4-207ENST00000397411 PEG10Q86TG7 708 aaKnown RBP21.51■■□□□ 1.03
TSPAN4-207ENST00000397411 ENTHD1Q8IYW4 607 aa21.51■■□□□ 1.03
TSPAN4-207ENST00000397411 DHRSXQ8N5I4 330 aa21.51■■□□□ 1.03
TSPAN4-207ENST00000397411 RFLNBQ8N5W9 214 aa21.51■■□□□ 1.03
TSPAN4-207ENST00000397411 YIPF7Q8N8F6 280 aa21.51■■□□□ 1.03
TSPAN4-207ENST00000397411 OR56B2PQ8NGI1 322 aa21.51■■□□□ 1.03
TSPAN4-207ENST00000397411 RHOXF1Q8NHV9 184 aa21.51■■□□□ 1.03
TSPAN4-207ENST00000397411 RAB1CQ92928 201 aa21.51■■□□□ 1.03
TSPAN4-207ENST00000397411 SPSB4Q96A44 273 aa21.51■■□□□ 1.03
TSPAN4-207ENST00000397411 A0A1W2PQL4 384 aaPredicted RBP21.5■■□□□ 1.03
TSPAN4-207ENST00000397411 F5H5P2 479 aa21.5■■□□□ 1.03
TSPAN4-207ENST00000397411 MAGEB4O15481 346 aaPredicted RBP21.5■■□□□ 1.03
TSPAN4-207ENST00000397411 RP2O75695 350 aa21.5■■□□□ 1.03
TSPAN4-207ENST00000397411 ANOS1P23352 680 aa21.5■■□□□ 1.03
TSPAN4-207ENST00000397411 MVKQ03426 396 aa21.5■■□□□ 1.03
TSPAN4-207ENST00000397411 SLC34A1Q06495 639 aa21.5■■□□□ 1.03
TSPAN4-207ENST00000397411 SPRNQ5BIV9 151 aa21.5■■□□□ 1.03
TSPAN4-207ENST00000397411 OGFRL1Q5TC84 451 aaPredicted RBP21.5■■□□□ 1.03
TSPAN4-207ENST00000397411 COMMD2Q86X83 199 aa21.5■■□□□ 1.03
TSPAN4-207ENST00000397411 ZNF319Q9P2F9 582 aa21.5■■□□□ 1.03
TSPAN4-207ENST00000397411 PPP1R3CQ9UQK1 317 aa21.5■■□□□ 1.03
TSPAN4-207ENST00000397411 PCDHGB1Q9Y5G3 927 aa21.5■■□□□ 1.03
TSPAN4-207ENST00000397411 CACNG2Q9Y698 323 aa21.5■■□□□ 1.03
TSPAN4-207ENST00000397411 DYSFO75923 2080 aa21.5■■□□□ 1.03
TSPAN4-207ENST00000397411 PRR32B1ATL7 298 aa21.49■■□□□ 1.03
TSPAN4-207ENST00000397411 HEXAP06865 529 aa21.49■■□□□ 1.03
TSPAN4-207ENST00000397411 GSK3AP49840 483 aa21.49■■□□□ 1.03
TSPAN4-207ENST00000397411 FAM3AP98173 230 aa21.49■■□□□ 1.03
TSPAN4-207ENST00000397411 SNCBQ16143 134 aa21.49■■□□□ 1.03
TSPAN4-207ENST00000397411 TMEM249Q2WGJ8 235 aa21.49■■□□□ 1.03
TSPAN4-207ENST00000397411 OR8B12Q8NGG6 310 aa21.49■■□□□ 1.03
TSPAN4-207ENST00000397411 MEGF10Q96KG7 1140 aa21.49■■□□□ 1.03
TSPAN4-207ENST00000397411 NARFLQ9H6Q4 476 aa21.49■■□□□ 1.03
TSPAN4-207ENST00000397411 MRPL15Q9P015 296 aaKnown RBP21.49■■□□□ 1.03
TSPAN4-207ENST00000397411 VPS13CQ709C8 3753 aa21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 A0A096LNT2 108 aa21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 DAPL1A0PJW8 107 aa21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 LRP5LA4QPB2 252 aa21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 LOC110117498-PIK3R3F6TDL0 507 aa21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 DLGAP1O14490 977 aa21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 CASQ2O14958 399 aaPredicted RBP21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 MLNRO43193 412 aa21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 GMDSO60547 372 aa21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 RPP14O95059 124 aaKnown RBP21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 ACTC1P68032 377 aa21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 ACTA1P68133 377 aa21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 AVPI1Q5T686 147 aa21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 CYB5R2Q6BCY4 276 aa21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 PLEKHG7Q6ZR37 379 aa21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 CSNK2A3Q8NEV1 391 aa21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 PBOV1Q9GZY1 135 aa21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 FAM206AQ9NX38 181 aa21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 NKX1-2Q9UD57 310 aaPredicted RBP21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 MRM2Q9UI43 246 aaKnown RBP21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 ZNF391Q9UJN7 358 aa21.48■■□□□ 1.03
TSPAN4-207ENST00000397411 IGHV3-64DA0A0J9YX35 117 aa21.47■■□□□ 1.03
TSPAN4-207ENST00000397411 METTL15A6NJ78 407 aa21.47■■□□□ 1.03
TSPAN4-207ENST00000397411 TACSTD2P09758 323 aa21.47■■□□□ 1.03
TSPAN4-207ENST00000397411 GABRB1P18505 474 aa21.47■■□□□ 1.03
TSPAN4-207ENST00000397411 GNALP38405 381 aa21.47■■□□□ 1.03
TSPAN4-207ENST00000397411 GZMKP49863 264 aa21.47■■□□□ 1.03
TSPAN4-207ENST00000397411 MZT1Q08AG7 82 aa21.47■■□□□ 1.03
TSPAN4-207ENST00000397411 FAM220AQ7Z4H9 259 aa21.47■■□□□ 1.03
TSPAN4-207ENST00000397411 FTMTQ8N4E7 242 aa21.47■■□□□ 1.03
TSPAN4-207ENST00000397411 SPERTQ8NA61 448 aa21.47■■□□□ 1.03
TSPAN4-207ENST00000397411 SETD9Q8NE22 299 aa21.47■■□□□ 1.03
TSPAN4-207ENST00000397411 ADAT1Q9BUB4 502 aaKnown RBP21.47■■□□□ 1.03
TSPAN4-207ENST00000397411 RPL36Q9Y3U8 105 aaKnown RBP21.47■■□□□ 1.03
TSPAN4-207ENST00000397411 YLPM1P49750 1951 aaKnown RBP21.47■■□□□ 1.03
TSPAN4-207ENST00000397411 hCG_38984A0A1B0GV85 526 aa21.46■■□□□ 1.03
TSPAN4-207ENST00000397411 IFNL4K9M1U5 179 aa21.46■■□□□ 1.03
TSPAN4-207ENST00000397411 MMP16P51512 607 aa21.46■■□□□ 1.03
TSPAN4-207ENST00000397411 BCL2L15Q5TBC7 163 aa21.46■■□□□ 1.03
TSPAN4-207ENST00000397411 ZNF771Q7L3S4 317 aaPredicted RBP21.46■■□□□ 1.03
TSPAN4-207ENST00000397411 SSX6Q7RTT6 188 aa21.46■■□□□ 1.03
TSPAN4-207ENST00000397411 OR8S1Q8NH09 359 aa21.46■■□□□ 1.03
TSPAN4-207ENST00000397411 MRPL48Q96GC5 212 aaKnown RBP21.46■■□□□ 1.03
TSPAN4-207ENST00000397411 SIGLEC11Q96RL6 698 aa21.46■■□□□ 1.03
TSPAN4-207ENST00000397411 MYCBPQ99417 103 aaPredicted RBP21.46■■□□□ 1.03
TSPAN4-207ENST00000397411 AMBNQ9NP70 447 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms