RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 DVL1O14640 695 aa14.44□□□□□ -0.1
EXOSC3-202ENST00000396521 LHBP01229 141 aa14.44□□□□□ -0.1
EXOSC3-202ENST00000396521 SLC6A6P31641 620 aa14.44□□□□□ -0.1
EXOSC3-202ENST00000396521 GYS2P54840 703 aa14.44□□□□□ -0.1
EXOSC3-202ENST00000396521 LIPEQ05469 1076 aa14.44□□□□□ -0.1
EXOSC3-202ENST00000396521 MICBQ29980 383 aa14.44□□□□□ -0.1
EXOSC3-202ENST00000396521 FGD3Q5JSP0 725 aa14.44□□□□□ -0.1
EXOSC3-202ENST00000396521 TEX36Q5VZQ5 186 aa14.44□□□□□ -0.1
EXOSC3-202ENST00000396521 CFAP77Q6ZQR2 320 aa14.44□□□□□ -0.1
EXOSC3-202ENST00000396521 SLC15A3Q8IY34 581 aa14.44□□□□□ -0.1
EXOSC3-202ENST00000396521 BOLLQ8N9W6 283 aaKnown RBP14.44□□□□□ -0.1
EXOSC3-202ENST00000396521 ZNF799Q96GE5 643 aa14.44□□□□□ -0.1
EXOSC3-202ENST00000396521 RNPEPL1Q9HAU8 725 aa14.44□□□□□ -0.1
EXOSC3-202ENST00000396521 SMURF1Q9HCE7 757 aa14.44□□□□□ -0.1
EXOSC3-202ENST00000396521 CMTM6Q9NX76 183 aa14.44□□□□□ -0.1
EXOSC3-202ENST00000396521 TSPAN15O95858 294 aa14.43□□□□□ -0.1
EXOSC3-202ENST00000396521 SERPINA1P01009 418 aa14.43□□□□□ -0.1
EXOSC3-202ENST00000396521 SMIM11AP58511 58 aa14.43□□□□□ -0.1
EXOSC3-202ENST00000396521 RFX4Q33E94 735 aa14.43□□□□□ -0.1
EXOSC3-202ENST00000396521 DRAM2Q6UX65 266 aa14.43□□□□□ -0.1
EXOSC3-202ENST00000396521 SLC36A1Q7Z2H8 476 aa14.43□□□□□ -0.1
EXOSC3-202ENST00000396521 PIP4P2Q8N4L2 257 aa14.43□□□□□ -0.1
EXOSC3-202ENST00000396521 FAM110DQ8TAY7 271 aaPredicted RBP14.43□□□□□ -0.1
EXOSC3-202ENST00000396521 FAM107BQ9H098 131 aa14.43□□□□□ -0.1
EXOSC3-202ENST00000396521 PNRC2Q9NPJ4 139 aaKnown RBP14.43□□□□□ -0.1
EXOSC3-202ENST00000396521 C1orf123Q9NWV4 160 aa14.43□□□□□ -0.1
EXOSC3-202ENST00000396521 FBLN5Q9UBX5 448 aa14.43□□□□□ -0.1
EXOSC3-202ENST00000396521 CAPN7Q9Y6W3 813 aa14.43□□□□□ -0.1
EXOSC3-202ENST00000396521 BHLHE40O14503 412 aa14.42□□□□□ -0.1
EXOSC3-202ENST00000396521 OR10H3O60404 316 aa14.42□□□□□ -0.1
EXOSC3-202ENST00000396521 HLA-DQA2P01906 255 aa14.42□□□□□ -0.1
EXOSC3-202ENST00000396521 GYPAP02724 150 aa14.42□□□□□ -0.1
EXOSC3-202ENST00000396521 ZNF823P16415 610 aa14.42□□□□□ -0.1
EXOSC3-202ENST00000396521 NOS3P29474 1203 aa14.42□□□□□ -0.1
EXOSC3-202ENST00000396521 OTX1P32242 354 aaPredicted RBP14.42□□□□□ -0.1
EXOSC3-202ENST00000396521 FXYD6P3P58550 94 aa14.42□□□□□ -0.1
EXOSC3-202ENST00000396521 SF3A3Q12874 501 aaKnown RBP eCLIP14.42□□□□□ -0.1
EXOSC3-202ENST00000396521 KRT72Q14CN4 511 aa14.42□□□□□ -0.1
EXOSC3-202ENST00000396521 C1orf122Q6ZSJ8 110 aa14.42□□□□□ -0.1
EXOSC3-202ENST00000396521 FAM90A1Q86YD7 464 aa14.42□□□□□ -0.1
EXOSC3-202ENST00000396521 LINC00346Q8IVM7 164 aa14.42□□□□□ -0.1
EXOSC3-202ENST00000396521 GCSAMQ8N6F7 178 aa14.42□□□□□ -0.1
EXOSC3-202ENST00000396521 LY6G5BQ8NDX9 201 aa14.42□□□□□ -0.1
EXOSC3-202ENST00000396521 RP9Q8TA86 221 aaKnown RBP14.42□□□□□ -0.1
EXOSC3-202ENST00000396521 C12orf43Q96C57 262 aaKnown RBP14.42□□□□□ -0.1
EXOSC3-202ENST00000396521 NMNAT3Q96T66 252 aa14.42□□□□□ -0.1
EXOSC3-202ENST00000396521 NDUFAF4Q9P032 175 aa14.42□□□□□ -0.1
EXOSC3-202ENST00000396521 ZNRD1Q9P1U0 126 aa14.42□□□□□ -0.1
EXOSC3-202ENST00000396521 ZNF816-ZNF321PA0A0X1KG74 233 aa14.41□□□□□ -0.1
EXOSC3-202ENST00000396521 hCG_1807616A0A1W2PRN6 198 aa14.41□□□□□ -0.1
EXOSC3-202ENST00000396521 A6NLC8 198 aa14.41□□□□□ -0.1
EXOSC3-202ENST00000396521 RNASEK-C17orf49H0YIS7 233 aa14.41□□□□□ -0.1
EXOSC3-202ENST00000396521 TIPRLO75663 272 aa14.41□□□□□ -0.1
EXOSC3-202ENST00000396521 PAHP00439 452 aa14.41□□□□□ -0.1
EXOSC3-202ENST00000396521 OPN1MWP04001 364 aa14.41□□□□□ -0.1
EXOSC3-202ENST00000396521 GRPP07492 148 aa14.41□□□□□ -0.1
EXOSC3-202ENST00000396521 OPN1MW2P0DN77 364 aa14.41□□□□□ -0.1
EXOSC3-202ENST00000396521 OPN1MW3P0DN78 364 aa14.41□□□□□ -0.1
EXOSC3-202ENST00000396521 SLC7A2P52569 658 aa14.41□□□□□ -0.1
EXOSC3-202ENST00000396521 ZNF92Q03936 586 aa14.41□□□□□ -0.1
EXOSC3-202ENST00000396521 Q6ZTK2 550 aa14.41□□□□□ -0.1
EXOSC3-202ENST00000396521 VMO1Q7Z5L0 202 aa14.41□□□□□ -0.1
EXOSC3-202ENST00000396521 NAA40Q86UY6 237 aa14.41□□□□□ -0.1
EXOSC3-202ENST00000396521 C1QL4Q86Z23 238 aa14.41□□□□□ -0.1
EXOSC3-202ENST00000396521 FANK1Q8TC84 345 aa14.41□□□□□ -0.1
EXOSC3-202ENST00000396521 ST8SIA4Q92187 359 aa14.41□□□□□ -0.1
EXOSC3-202ENST00000396521 FAM162AQ96A26 154 aa14.41□□□□□ -0.1
EXOSC3-202ENST00000396521 RASSF4Q9H2L5 321 aa14.41□□□□□ -0.1
EXOSC3-202ENST00000396521 RPRD1BQ9NQG5 326 aaKnown RBP14.41□□□□□ -0.1
EXOSC3-202ENST00000396521 ANKRD61A6NGH8 418 aa14.4□□□□□ -0.1
EXOSC3-202ENST00000396521 XRCC2O43543 280 aa14.4□□□□□ -0.1
EXOSC3-202ENST00000396521 HIST1H1CP16403 213 aaKnown RBP14.4□□□□□ -0.1
EXOSC3-202ENST00000396521 IFNGR2P38484 337 aa14.4□□□□□ -0.1
EXOSC3-202ENST00000396521 NAA10P41227 235 aaPredicted RBP14.4□□□□□ -0.1
EXOSC3-202ENST00000396521 PRSS12P56730 875 aa14.4□□□□□ -0.1
EXOSC3-202ENST00000396521 ACSM1Q08AH1 577 aa14.4□□□□□ -0.1
EXOSC3-202ENST00000396521 KPRPQ5T749 579 aaPredicted RBP14.4□□□□□ -0.1
EXOSC3-202ENST00000396521 CGB2Q6NT52 195 aa14.4□□□□□ -0.1
EXOSC3-202ENST00000396521 OR8S1Q8NH09 359 aa14.4□□□□□ -0.1
EXOSC3-202ENST00000396521 OR4K13Q8NH42 304 aa14.4□□□□□ -0.1
EXOSC3-202ENST00000396521 RCN3Q96D15 328 aa14.4□□□□□ -0.1
EXOSC3-202ENST00000396521 MAP6Q96JE9 813 aa14.4□□□□□ -0.1
EXOSC3-202ENST00000396521 DHRS1Q96LJ7 313 aa14.4□□□□□ -0.1
EXOSC3-202ENST00000396521 FAM234AQ9H0X4 552 aa14.4□□□□□ -0.1
EXOSC3-202ENST00000396521 DNTTIP1Q9H147 329 aa14.4□□□□□ -0.1
EXOSC3-202ENST00000396521 OR52D1Q9H346 318 aa14.4□□□□□ -0.1
EXOSC3-202ENST00000396521 SP140LQ9H930 580 aa14.4□□□□□ -0.1
EXOSC3-202ENST00000396521 ONECUT1Q9UBC0 465 aa14.4□□□□□ -0.1
EXOSC3-202ENST00000396521 PRPF19Q9UMS4 504 aaKnown RBP14.4□□□□□ -0.1
EXOSC3-202ENST00000396521 SAMD4AQ9UPU9 718 aaKnown RBP14.4□□□□□ -0.1
EXOSC3-202ENST00000396521 TRBV4-1A0A0J9YWV2 114 aa14.39□□□□□ -0.11
EXOSC3-202ENST00000396521 ANKRD30BLA7E2S9 258 aa14.39□□□□□ -0.11
EXOSC3-202ENST00000396521 NDUFB3O43676 98 aa14.39□□□□□ -0.11
EXOSC3-202ENST00000396521 ALX3O95076 343 aa14.39□□□□□ -0.11
EXOSC3-202ENST00000396521 GABRA5P31644 462 aa14.39□□□□□ -0.11
EXOSC3-202ENST00000396521 EGR3Q06889 387 aa14.39□□□□□ -0.11
EXOSC3-202ENST00000396521 HERPUD1Q15011 391 aa14.39□□□□□ -0.11
EXOSC3-202ENST00000396521 SNCBQ16143 134 aa14.39□□□□□ -0.11
EXOSC3-202ENST00000396521 BEAN1Q3B7T3 259 aa14.39□□□□□ -0.11
EXOSC3-202ENST00000396521 LRRC10Q5BKY1 277 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms