RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 HYAL1Q12794 435 aa12.74□□□□□ -0.37
CLIP2-203ENST00000395060 C9orf152Q5JTZ5 239 aa12.74□□□□□ -0.37
CLIP2-203ENST00000395060 CARD17Q5XLA6 110 aa12.74□□□□□ -0.37
CLIP2-203ENST00000395060 GLIPR1L1Q6UWM5 242 aa12.74□□□□□ -0.37
CLIP2-203ENST00000395060 TMEM151BQ8IW70 566 aa12.74□□□□□ -0.37
CLIP2-203ENST00000395060 DEFB119Q8N690 84 aa12.74□□□□□ -0.37
CLIP2-203ENST00000395060 PMM1Q92871 262 aa12.74□□□□□ -0.37
CLIP2-203ENST00000395060 TMEM230Q96A57 120 aa12.74□□□□□ -0.37
CLIP2-203ENST00000395060 CRTAPO75718 401 aaPredicted RBP12.73□□□□□ -0.37
CLIP2-203ENST00000395060 BGLAPP02818 100 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 CTSEP14091 401 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 IGFBP3P17936 291 aaPredicted RBP12.73□□□□□ -0.37
CLIP2-203ENST00000395060 PTAFRP25105 342 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 ARL5BQ96KC2 179 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 MESP1Q9BRJ9 268 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 SLCO5A1Q9H2Y9 848 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 SLC17A5Q9NRA2 495 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 SLCO1B1Q9Y6L6 691 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 R4GMQ9 66 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 PQLC2LA1A4F0 135 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 SLC33A1O00400 549 aaPredicted RBP12.73□□□□□ -0.37
CLIP2-203ENST00000395060 PHYHO14832 338 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 RAD51DO75771 328 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 LY86O95711 162 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 OR3A2P47893 321 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 CAV2P51636 162 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 PRSS12P56730 875 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 POU3F1Q03052 451 aaPredicted RBP12.73□□□□□ -0.37
CLIP2-203ENST00000395060 MISPQ8IVT2 679 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 SLC25A43Q8WUT9 341 aaPredicted RBP12.73□□□□□ -0.37
CLIP2-203ENST00000395060 HIST1H2BAQ96A08 127 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 RAB33BQ9H082 229 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 PDE7BQ9NP56 450 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 G6PC2Q9NQR9 355 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 RAB22AQ9UL26 194 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 A0A1W2PQF6 199 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 TXNDC12O95881 172 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 IL2RAP01589 272 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 HCKP08631 526 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 GP1BBP13224 206 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 AMY2BP19961 511 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 ZNF93P35789 620 aaPredicted RBP12.73□□□□□ -0.37
CLIP2-203ENST00000395060 DHPSP49366 369 aaPredicted RBP12.73□□□□□ -0.37
CLIP2-203ENST00000395060 SSBP1Q04837 148 aaKnown RBP12.73□□□□□ -0.37
CLIP2-203ENST00000395060 TERB2Q8NHR7 220 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 ASB17Q8WXJ9 295 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 ARHGAP5-AS1Q96IT6 56 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 KIRREL1Q96J84 757 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 JSRP1Q96MG2 331 aaPredicted RBP12.73□□□□□ -0.37
CLIP2-203ENST00000395060 DUSP15Q9H1R2 295 aaPredicted RBP12.73□□□□□ -0.37
CLIP2-203ENST00000395060 ZNF701Q9NV72 531 aaPredicted RBP12.73□□□□□ -0.37
CLIP2-203ENST00000395060 OBP2AQ9NY56 170 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 PLA2G2EQ9NZK7 142 aa12.73□□□□□ -0.37
CLIP2-203ENST00000395060 VSX1Q9NZR4 365 aaPredicted RBP12.73□□□□□ -0.37
CLIP2-203ENST00000395060 TMED7-TICAM2A0A0A6YYA0 188 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 A0A0A6YYD4 124 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 A0A1W2PPE2 198 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 MELTFP08582 738 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 OR13C7P0DN81 318 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 CDAP32320 146 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 PRTGQ2VWP7 1150 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 AWAT1Q58HT5 328 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 PLAC9Q5JTB6 97 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 ACER2Q5QJU3 275 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 ZNF704Q6ZNC4 412 aaPredicted RBP12.72□□□□□ -0.37
CLIP2-203ENST00000395060 C19orf47Q8N9M1 422 aaKnown RBP12.72□□□□□ -0.37
CLIP2-203ENST00000395060 C5orf34Q96MH7 638 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 TGM7Q96PF1 710 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 SPACA1Q9HBV2 294 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 SMCO4Q9NRQ5 59 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 FBXO7Q9Y3I1 522 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 TRAV36DV7A0A075B6V5 113 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 IGHV3-20A0A0C4DH32 117 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 F8VVB4 439 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 F8VWA3 439 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 LDLRAD4O15165 306 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 EMC4Q5J8M3 183 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 ABHD12BQ7Z5M8 362 aaPredicted RBP12.72□□□□□ -0.37
CLIP2-203ENST00000395060 ADAMTS18Q8TE60 1221 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 RAB3CQ96E17 227 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 BSCL2Q96G97 398 aaPredicted RBP12.72□□□□□ -0.37
CLIP2-203ENST00000395060 WDR77Q9BQA1 342 aaPredicted RBP12.72□□□□□ -0.37
CLIP2-203ENST00000395060 RCL1Q9Y2P8 373 aaKnown RBP12.72□□□□□ -0.37
CLIP2-203ENST00000395060 FLVCR1Q9Y5Y0 555 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 NUP210LQ5VU65 1888 aa12.72□□□□□ -0.37
CLIP2-203ENST00000395060 PRAMEF26H0Y7S4 382 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 TMEM127O75204 238 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 NME1P15531 152 aaKnown RBP12.71□□□□□ -0.37
CLIP2-203ENST00000395060 GFERP55789 205 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 SP6Q3SY56 376 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 TMEM128Q5BJH2 165 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 PDZD11Q5EBL8 140 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 ZNF440Q8IYI8 595 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 ZDHHC22Q8N966 263 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 AKR7LQ8NHP1 331 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 PTPMT1Q8WUK0 201 aaPredicted RBP12.71□□□□□ -0.37
CLIP2-203ENST00000395060 TMEM100Q9NV29 134 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 EHFQ9NZC4 300 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 RFNGQ9Y644 331 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 MYO7BQ6PIF6 2116 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms