RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 KRCC1Q9NPI7 259 aaPredicted RBP17.4■□□□□ 0.38
TRAF4-203ENST00000394925 NDUFAF4Q9P032 175 aa17.4■□□□□ 0.38
TRAF4-203ENST00000394925 RPUSD1Q9UJJ7 312 aaKnown RBP17.4■□□□□ 0.38
TRAF4-203ENST00000394925 TET2Q6N021 2002 aaPredicted RBP17.4■□□□□ 0.38
TRAF4-203ENST00000394925 ZNF816-ZNF321PA0A0X1KG74 233 aa17.39■□□□□ 0.37
TRAF4-203ENST00000394925 NME4O00746 187 aa17.39■□□□□ 0.37
TRAF4-203ENST00000394925 ANOS1P23352 680 aa17.39■□□□□ 0.37
TRAF4-203ENST00000394925 SLC7A2P52569 658 aa17.39■□□□□ 0.37
TRAF4-203ENST00000394925 ZBTB46Q86UZ6 589 aa17.39■□□□□ 0.37
TRAF4-203ENST00000394925 LNX2Q8N448 690 aa17.39■□□□□ 0.37
TRAF4-203ENST00000394925 SPTSSAQ969W0 71 aa17.39■□□□□ 0.37
TRAF4-203ENST00000394925 NSRP1Q9H0G5 558 aaKnown RBP17.39■□□□□ 0.37
TRAF4-203ENST00000394925 MRPL22Q9NWU5 206 aaKnown RBP17.39■□□□□ 0.37
TRAF4-203ENST00000394925 ONECUT1Q9UBC0 465 aa17.39■□□□□ 0.37
TRAF4-203ENST00000394925 KPTNQ9Y664 436 aa17.39■□□□□ 0.37
TRAF4-203ENST00000394925 A0A1B0GVI7 797 aa17.38■□□□□ 0.37
TRAF4-203ENST00000394925 C5orf63A6NC05 138 aa17.38■□□□□ 0.37
TRAF4-203ENST00000394925 BTBD17A6NE02 478 aa17.38■□□□□ 0.37
TRAF4-203ENST00000394925 DIRAS1O95057 198 aa17.38■□□□□ 0.37
TRAF4-203ENST00000394925 FBP1P09467 338 aa17.38■□□□□ 0.37
TRAF4-203ENST00000394925 CSF1P09603 554 aa17.38■□□□□ 0.37
TRAF4-203ENST00000394925 RHCEP18577 417 aa17.38■□□□□ 0.37
TRAF4-203ENST00000394925 SLC6A6P31641 620 aa17.38■□□□□ 0.37
TRAF4-203ENST00000394925 GSK3BP49841 420 aa17.38■□□□□ 0.37
TRAF4-203ENST00000394925 EGR3Q06889 387 aa17.38■□□□□ 0.37
TRAF4-203ENST00000394925 C11orf91Q3C1V1 193 aa17.38■□□□□ 0.37
TRAF4-203ENST00000394925 GLYATL3Q5SZD4 288 aa17.38■□□□□ 0.37
TRAF4-203ENST00000394925 SPERTQ8NA61 448 aa17.38■□□□□ 0.37
TRAF4-203ENST00000394925 IFT27Q9BW83 186 aa17.38■□□□□ 0.37
TRAF4-203ENST00000394925 OR52D1Q9H346 318 aa17.38■□□□□ 0.37
TRAF4-203ENST00000394925 FGFR1OP2Q9NVK5 253 aa17.38■□□□□ 0.37
TRAF4-203ENST00000394925 MRPL15Q9P015 296 aaKnown RBP17.38■□□□□ 0.37
TRAF4-203ENST00000394925 ZNRD1Q9P1U0 126 aa17.38■□□□□ 0.37
TRAF4-203ENST00000394925 KAAG1Q9UBP8 84 aa17.38■□□□□ 0.37
TRAF4-203ENST00000394925 VPREB3Q9UKI3 123 aa17.38■□□□□ 0.37
TRAF4-203ENST00000394925 CAB39Q9Y376 341 aaPredicted RBP17.38■□□□□ 0.37
TRAF4-203ENST00000394925 A0A1B0GW55 424 aa17.37■□□□□ 0.37
TRAF4-203ENST00000394925 OR6C68A6NDL8 312 aa17.37■□□□□ 0.37
TRAF4-203ENST00000394925 ARPC3O15145 178 aa17.37■□□□□ 0.37
TRAF4-203ENST00000394925 TSPAN9O75954 239 aa17.37■□□□□ 0.37
TRAF4-203ENST00000394925 LHBP01229 141 aa17.37■□□□□ 0.37
TRAF4-203ENST00000394925 DUX4L2P0CJ85 424 aa17.37■□□□□ 0.37
TRAF4-203ENST00000394925 DUX4L3P0CJ86 424 aa17.37■□□□□ 0.37
TRAF4-203ENST00000394925 DUX4L4P0CJ87 422 aa17.37■□□□□ 0.37
TRAF4-203ENST00000394925 DUX4L5P0CJ88 424 aa17.37■□□□□ 0.37
TRAF4-203ENST00000394925 DUX4L6P0CJ89 424 aa17.37■□□□□ 0.37
TRAF4-203ENST00000394925 DUX4L7P0CJ90 424 aa17.37■□□□□ 0.37
TRAF4-203ENST00000394925 NOS3P29474 1203 aa17.37■□□□□ 0.37
TRAF4-203ENST00000394925 RPS27P42677 84 aaKnown RBP17.37■□□□□ 0.37
TRAF4-203ENST00000394925 ELF3P78545 371 aaPredicted RBP17.37■□□□□ 0.37
TRAF4-203ENST00000394925 PRB3Q04118 309 aaPredicted RBP17.37■□□□□ 0.37
TRAF4-203ENST00000394925 FBLN7Q53RD9 439 aa17.37■□□□□ 0.37
TRAF4-203ENST00000394925 TEX36Q5VZQ5 186 aa17.37■□□□□ 0.37
TRAF4-203ENST00000394925 CGB2Q6NT52 195 aa17.37■□□□□ 0.37
TRAF4-203ENST00000394925 DUX4L9Q6RFH8 374 aaPredicted RBP17.37■□□□□ 0.37
TRAF4-203ENST00000394925 SDR9C7Q8NEX9 313 aa17.37■□□□□ 0.37
TRAF4-203ENST00000394925 CCL13Q99616 98 aa17.37■□□□□ 0.37
TRAF4-203ENST00000394925 SIRT7Q9NRC8 400 aa17.37■□□□□ 0.37
TRAF4-203ENST00000394925 ADA2Q9NZK5 511 aa17.37■□□□□ 0.37
TRAF4-203ENST00000394925 DNAJB11Q9UBS4 358 aa17.37■□□□□ 0.37
TRAF4-203ENST00000394925 DUX4Q9UBX2 424 aa17.37■□□□□ 0.37
TRAF4-203ENST00000394925 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.36■□□□□ 0.37
TRAF4-203ENST00000394925 A0A1W2PRD5 423 aa17.36■□□□□ 0.37
TRAF4-203ENST00000394925 A0A1W2PRF3 423 aa17.36■□□□□ 0.37
TRAF4-203ENST00000394925 A0A1W2PRM7 423 aa17.36■□□□□ 0.37
TRAF4-203ENST00000394925 G3V4G9 280 aa17.36■□□□□ 0.37
TRAF4-203ENST00000394925 BHLHE40O14503 412 aa17.36■□□□□ 0.37
TRAF4-203ENST00000394925 ZNF823P16415 610 aa17.36■□□□□ 0.37
TRAF4-203ENST00000394925 MZT1Q08AG7 82 aa17.36■□□□□ 0.37
TRAF4-203ENST00000394925 OR56B2PQ8NGI1 322 aa17.36■□□□□ 0.37
TRAF4-203ENST00000394925 RP9Q8TA86 221 aaKnown RBP17.36■□□□□ 0.37
TRAF4-203ENST00000394925 FUZQ9BT04 418 aa17.36■□□□□ 0.37
TRAF4-203ENST00000394925 C14orf119Q9NWQ9 140 aa17.36■□□□□ 0.37
TRAF4-203ENST00000394925 ZNF281Q9Y2X9 895 aa17.36■□□□□ 0.37
TRAF4-203ENST00000394925 N6AMT1Q9Y5N5 214 aa17.36■□□□□ 0.37
TRAF4-203ENST00000394925 TGFBR2P37173 567 aa17.35■□□□□ 0.37
TRAF4-203ENST00000394925 DLX1P56177 255 aa17.35■□□□□ 0.37
TRAF4-203ENST00000394925 KRT72Q14CN4 511 aa17.35■□□□□ 0.37
TRAF4-203ENST00000394925 PCK2Q16822 640 aa17.35■□□□□ 0.37
TRAF4-203ENST00000394925 HIST2H2BDQ6DRA6 164 aa17.35■□□□□ 0.37
TRAF4-203ENST00000394925 DRAM2Q6UX65 266 aa17.35■□□□□ 0.37
TRAF4-203ENST00000394925 LY6G5BQ8NDX9 201 aa17.35■□□□□ 0.37
TRAF4-203ENST00000394925 NPRL2Q8WTW4 380 aa17.35■□□□□ 0.37
TRAF4-203ENST00000394925 C7orf34Q96L11 122 aa17.35■□□□□ 0.37
TRAF4-203ENST00000394925 DHRS1Q96LJ7 313 aa17.35■□□□□ 0.37
TRAF4-203ENST00000394925 HOPXQ9BPY8 73 aaPredicted RBP17.35■□□□□ 0.37
TRAF4-203ENST00000394925 KCTD14Q9BQ13 255 aaPredicted RBP17.35■□□□□ 0.37
TRAF4-203ENST00000394925 KCNG2Q9UJ96 466 aa17.35■□□□□ 0.37
TRAF4-203ENST00000394925 PLXNB1O43157 2135 aa17.34■□□□□ 0.37
TRAF4-203ENST00000394925 SLC2A1P11166 492 aa17.34■□□□□ 0.37
TRAF4-203ENST00000394925 COX4I1P13073 169 aa17.34■□□□□ 0.37
TRAF4-203ENST00000394925 EEF1B2P24534 225 aaKnown RBP17.34■□□□□ 0.37
TRAF4-203ENST00000394925 OTX1P32242 354 aaPredicted RBP17.34■□□□□ 0.37
TRAF4-203ENST00000394925 PYCR1P32322 319 aa17.34■□□□□ 0.37
TRAF4-203ENST00000394925 PRKXP51817 358 aa17.34■□□□□ 0.37
TRAF4-203ENST00000394925 MICBQ29980 383 aa17.34■□□□□ 0.37
TRAF4-203ENST00000394925 BEAN1Q3B7T3 259 aa17.34■□□□□ 0.37
TRAF4-203ENST00000394925 WDR38Q5JTN6 314 aa17.34■□□□□ 0.37
TRAF4-203ENST00000394925 SLC35F1Q5T1Q4 408 aa17.34■□□□□ 0.37
TRAF4-203ENST00000394925 SLC35E4Q6ICL7 350 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms