RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 APOC1P02654 83 aa11.83□□□□□ -0.51
NFKB1-202ENST00000394820 ZNF44P15621 663 aa11.83□□□□□ -0.51
NFKB1-202ENST00000394820 GNRHRP30968 328 aa11.83□□□□□ -0.51
NFKB1-202ENST00000394820 KIR3DL2P43630 455 aa11.83□□□□□ -0.51
NFKB1-202ENST00000394820 RTN4RL2Q86UN3 420 aa11.83□□□□□ -0.51
NFKB1-202ENST00000394820 LDLRAD3Q86YD5 345 aa11.83□□□□□ -0.51
NFKB1-202ENST00000394820 OTOSQ8NHW6 89 aa11.83□□□□□ -0.51
NFKB1-202ENST00000394820 SGK3Q96BR1 496 aa11.83□□□□□ -0.51
NFKB1-202ENST00000394820 C8orf33Q9H7E9 229 aaPredicted RBP11.83□□□□□ -0.51
NFKB1-202ENST00000394820 SDHAF3Q9NRP4 125 aa11.83□□□□□ -0.51
NFKB1-202ENST00000394820 SUSD2Q9UGT4 822 aa11.83□□□□□ -0.51
NFKB1-202ENST00000394820 VSIG4Q9Y279 399 aa11.83□□□□□ -0.51
NFKB1-202ENST00000394820 PRSS37A4D1T9 235 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 TNFSF14O43557 240 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 SIGLEC6O43699 453 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 GSTZ1O43708 216 aaPredicted RBP11.83□□□□□ -0.52
NFKB1-202ENST00000394820 OR2F2O95006 317 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 WDPCPO95876 746 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 IL11P20809 199 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 GALP22466 123 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 MGAT2Q10469 447 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 OR2F1Q13607 317 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 SLC35D3Q5M8T2 416 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 FHL5Q5TD97 284 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 C1orf140Q5VVS0 124 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 RBMS3Q6XE24 437 aaKnown RBP11.83□□□□□ -0.52
NFKB1-202ENST00000394820 LYG2Q86SG7 212 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 MRGPREQ86SM8 312 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 LINC00518Q8N0U6 118 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 OR5L1Q8NGL2 311 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 ARL5BQ96KC2 179 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 UQCC2Q9BRT2 126 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 SHARPINQ9H0F6 387 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 PCOLCE2Q9UKZ9 415 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 LOC101059948A0A1B0GTJ6 334 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 FAM221BA6H8Z2 402 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 FCGR2AP12318 317 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 RPL27P61353 136 aaKnown RBP11.83□□□□□ -0.52
NFKB1-202ENST00000394820 FABP9Q0Z7S8 132 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 MEF2DQ14814 521 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 ELFN2Q5R3F8 820 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 TMEM244Q5VVB8 128 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 OGFOD3Q6PK18 319 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 SULF2Q8IWU5 870 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 MAGT1Q9H0U3 335 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 EMC3Q9P0I2 261 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 HS3ST3A1Q9Y663 406 aa11.83□□□□□ -0.52
NFKB1-202ENST00000394820 FANCMQ8IYD8 2048 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 MPTX1A8MV57 137 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 FOXS1O43638 330 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 SFTA3P0C7M3 94 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 CD38P28907 300 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 VAMP2P63027 116 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 HAGHQ16775 308 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 C8orf44Q96CB5 159 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 NUDT9Q9BW91 350 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 ANKRD10Q9NXR5 420 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 C9orf170A2RU37 121 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 PRR19A6NJB7 356 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 A6NLC8 198 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 SOCS1O15524 211 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 CPN1P15169 458 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 CEBPEQ15744 281 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 TAF9Q16594 264 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 EIF2S3LQ2VIR3 472 aaKnown RBP11.82□□□□□ -0.52
NFKB1-202ENST00000394820 GPR157Q5UAW9 335 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 HSD17B13Q7Z5P4 300 aaPredicted RBP11.82□□□□□ -0.52
NFKB1-202ENST00000394820 EID2Q8N6I1 236 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 MITD1Q8WV92 249 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 OR8B4Q96RC9 309 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 MRI1Q9BV20 369 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 ZNF442Q9H7R0 627 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 A0A1W2PPC4 97 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 H3BMH7 237 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 CT45A8P0DMV1 189 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 CT45A9P0DMV2 189 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 CRABP1P29762 137 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 ZNF41P51814 821 aaPredicted RBP11.82□□□□□ -0.52
NFKB1-202ENST00000394820 EIF5AP63241 154 aaKnown RBP11.82□□□□□ -0.52
NFKB1-202ENST00000394820 ZNF117Q03924 483 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 TMEM176BQ3YBM2 270 aaPredicted RBP11.82□□□□□ -0.52
NFKB1-202ENST00000394820 CT45A2Q5DJT8 189 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 LANCL3Q6ZV70 420 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 RXFP4Q8TDU9 374 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 ZFP57Q9NU63 452 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 SLC5A6Q9Y289 635 aa11.82□□□□□ -0.52
NFKB1-202ENST00000394820 VSTM2BA6NLU5 285 aa11.81□□□□□ -0.52
NFKB1-202ENST00000394820 MTRF1O75570 445 aaKnown RBP11.81□□□□□ -0.52
NFKB1-202ENST00000394820 UPK3AO75631 287 aa11.81□□□□□ -0.52
NFKB1-202ENST00000394820 IGHV3-9P01782 118 aa11.81□□□□□ -0.52
NFKB1-202ENST00000394820 GP1BAP07359 652 aa11.81□□□□□ -0.52
NFKB1-202ENST00000394820 ZNF440Q8IYI8 595 aa11.81□□□□□ -0.52
NFKB1-202ENST00000394820 BHLHE23Q8NDY6 225 aa11.81□□□□□ -0.52
NFKB1-202ENST00000394820 OR5M8Q8NGP6 311 aa11.81□□□□□ -0.52
NFKB1-202ENST00000394820 OR6K3Q8NGY3 331 aa11.81□□□□□ -0.52
NFKB1-202ENST00000394820 LIN37Q96GY3 246 aaPredicted RBP11.81□□□□□ -0.52
NFKB1-202ENST00000394820 LCORQ96JN0 433 aaPredicted RBP11.81□□□□□ -0.52
NFKB1-202ENST00000394820 SUCNR1Q9BXA5 334 aa11.81□□□□□ -0.52
NFKB1-202ENST00000394820 ZNF160Q9HCG1 818 aa11.81□□□□□ -0.52
NFKB1-202ENST00000394820 GPR84Q9NQS5 396 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms