RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 CCL2P13500 99 aa16.61■□□□□ 0.25
CLDND1-203ENST00000394181 EIF2S3P41091 472 aaKnown RBP16.61■□□□□ 0.25
CLDND1-203ENST00000394181 PCBD1P61457 104 aa16.61■□□□□ 0.25
CLDND1-203ENST00000394181 ECH1Q13011 328 aa16.61■□□□□ 0.25
CLDND1-203ENST00000394181 DRAM2Q6UX65 266 aa16.61■□□□□ 0.25
CLDND1-203ENST00000394181 BAIAP2L2Q6UXY1 529 aa16.61■□□□□ 0.25
CLDND1-203ENST00000394181 RNF121Q9H920 327 aa16.61■□□□□ 0.25
CLDND1-203ENST00000394181 PLEKHA1Q9HB21 404 aa16.61■□□□□ 0.25
CLDND1-203ENST00000394181 CLCF1Q9UBD9 225 aa16.61■□□□□ 0.25
CLDND1-203ENST00000394181 LDLRAD4O15165 306 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 CTDSPLO15194 276 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 SULT1B1O43704 296 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 GSTZ1O43708 216 aaPredicted RBP16.6■□□□□ 0.25
CLDND1-203ENST00000394181 SDHBP21912 280 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 SCAND1P57086 179 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 ZNF554Q86TJ5 538 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 NKAIN3Q8N8D7 197 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 ENKURQ8TC29 256 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 DOCK7Q96N67 2140 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 ATG5Q9H1Y0 275 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 B3GNT2Q9NY97 397 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 ZNF175Q9Y473 711 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 V9GYS6 101 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 AQP7O14520 342 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 XRCC3O43542 346 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 IL18BPO95998 194 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 ACKR3P25106 362 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 BTCP35070 178 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 P4HA3Q7Z4N8 544 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 RBMXL3Q8N7X1 1067 aaKnown RBP16.6■□□□□ 0.25
CLDND1-203ENST00000394181 NPRL2Q8WTW4 380 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 SORCS2Q96PQ0 1159 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 OR10A2Q9H208 303 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 PIGLQ9Y2B2 252 aa16.6■□□□□ 0.25
CLDND1-203ENST00000394181 MED12LQ86YW9 2145 aa16.59■□□□□ 0.25
CLDND1-203ENST00000394181 LOC100509620A0A075B734 347 aa16.59■□□□□ 0.25
CLDND1-203ENST00000394181 GGT3PA6NGU5 568 aa16.59■□□□□ 0.25
CLDND1-203ENST00000394181 OR6C65A6NJZ3 312 aa16.59■□□□□ 0.25
CLDND1-203ENST00000394181 DHRS3O75911 302 aa16.59■□□□□ 0.25
CLDND1-203ENST00000394181 HNRNPCP07910 306 aaKnown RBP eCLIP16.59■□□□□ 0.25
CLDND1-203ENST00000394181 ZNF93P35789 620 aaPredicted RBP16.59■□□□□ 0.25
CLDND1-203ENST00000394181 GDNFP39905 211 aa16.59■□□□□ 0.25
CLDND1-203ENST00000394181 TNK1Q13470 666 aa16.59■□□□□ 0.25
CLDND1-203ENST00000394181 UBE2V2Q15819 145 aa16.59■□□□□ 0.25
CLDND1-203ENST00000394181 NRN1LQ496H8 165 aa16.59■□□□□ 0.25
CLDND1-203ENST00000394181 HIKESHIQ53FT3 197 aa16.59■□□□□ 0.25
CLDND1-203ENST00000394181 MZT2BQ6NZ67 158 aa16.59■□□□□ 0.25
CLDND1-203ENST00000394181 ZNF627Q7L945 461 aa16.59■□□□□ 0.25
CLDND1-203ENST00000394181 PAQR4Q8N4S7 273 aaPredicted RBP16.59■□□□□ 0.25
CLDND1-203ENST00000394181 METTL17Q9H7H0 456 aaPredicted RBP16.59■□□□□ 0.25
CLDND1-203ENST00000394181 PLSCR2Q9NRY7 297 aa16.59■□□□□ 0.25
CLDND1-203ENST00000394181 TRAV18A0A075B6X5 111 aa16.58■□□□□ 0.25
CLDND1-203ENST00000394181 A0A0B4J293 547 aa16.58■□□□□ 0.25
CLDND1-203ENST00000394181 FAM240BA0A1B0GVZ2 78 aa16.58■□□□□ 0.25
CLDND1-203ENST00000394181 APOC1P02654 83 aa16.58■□□□□ 0.25
CLDND1-203ENST00000394181 CD79AP11912 226 aa16.58■□□□□ 0.25
CLDND1-203ENST00000394181 MOGAT2Q3SYC2 334 aa16.58■□□□□ 0.25
CLDND1-203ENST00000394181 CRIP3Q6Q6R5 217 aa16.58■□□□□ 0.25
CLDND1-203ENST00000394181 Q6ZS92 163 aa16.58■□□□□ 0.25
CLDND1-203ENST00000394181 TOMM5Q8N4H5 51 aa16.58■□□□□ 0.25
CLDND1-203ENST00000394181 OR52H1Q8NGJ2 320 aa16.58■□□□□ 0.25
CLDND1-203ENST00000394181 FAM46BQ96A09 425 aa16.58■□□□□ 0.25
CLDND1-203ENST00000394181 REEP6Q96HR9 211 aa16.58■□□□□ 0.25
CLDND1-203ENST00000394181 CACNG2Q9Y698 323 aa16.58■□□□□ 0.25
CLDND1-203ENST00000394181 UNC119Q13432 240 aa16.58■□□□□ 0.24
CLDND1-203ENST00000394181 KLF9Q13886 244 aaPredicted RBP16.58■□□□□ 0.24
CLDND1-203ENST00000394181 FBXW9Q5XUX1 488 aa16.58■□□□□ 0.24
CLDND1-203ENST00000394181 PGAP1Q75T13 922 aa16.58■□□□□ 0.24
CLDND1-203ENST00000394181 FGD2Q7Z6J4 655 aa16.58■□□□□ 0.24
CLDND1-203ENST00000394181 ANGPTL5Q86XS5 388 aa16.58■□□□□ 0.24
CLDND1-203ENST00000394181 SPACA3Q8IXA5 215 aa16.58■□□□□ 0.24
CLDND1-203ENST00000394181 ITFG2Q969R8 447 aa16.58■□□□□ 0.24
CLDND1-203ENST00000394181 FOXRED1Q96CU9 486 aaPredicted RBP16.58■□□□□ 0.24
CLDND1-203ENST00000394181 SSUH2Q9Y2M2 353 aa16.58■□□□□ 0.24
CLDND1-203ENST00000394181 GABARAPH6UMI1 98 aa16.57■□□□□ 0.24
CLDND1-203ENST00000394181 MT-ND4P03905 459 aa16.57■□□□□ 0.24
CLDND1-203ENST00000394181 CCNOP22674 350 aa16.57■□□□□ 0.24
CLDND1-203ENST00000394181 OR3A4PP47883 348 aa16.57■□□□□ 0.24
CLDND1-203ENST00000394181 QRFPP83859 136 aa16.57■□□□□ 0.24
CLDND1-203ENST00000394181 GUCA2AQ02747 115 aa16.57■□□□□ 0.24
CLDND1-203ENST00000394181 PLEKHN1Q494U1 663 aaPredicted RBP16.57■□□□□ 0.24
CLDND1-203ENST00000394181 Q6ZSR3 168 aa16.57■□□□□ 0.24
CLDND1-203ENST00000394181 DUSP18Q8NEJ0 188 aa16.57■□□□□ 0.24
CLDND1-203ENST00000394181 UPRTQ96BW1 309 aa16.57■□□□□ 0.24
CLDND1-203ENST00000394181 ZC3HAV1LQ96H79 300 aaKnown RBP16.57■□□□□ 0.24
CLDND1-203ENST00000394181 GMPPAQ96IJ6 420 aaPredicted RBP16.57■□□□□ 0.24
CLDND1-203ENST00000394181 ELF5Q9UKW6 265 aaPredicted RBP16.57■□□□□ 0.24
CLDND1-203ENST00000394181 SS18L1O75177 396 aaPredicted RBP16.57■□□□□ 0.24
CLDND1-203ENST00000394181 HCKP08631 526 aa16.57■□□□□ 0.24
CLDND1-203ENST00000394181 EDN3P14138 238 aa16.57■□□□□ 0.24
CLDND1-203ENST00000394181 SLC6A1P30531 599 aa16.57■□□□□ 0.24
CLDND1-203ENST00000394181 C9orf106Q8NAJ2 232 aa16.57■□□□□ 0.24
CLDND1-203ENST00000394181 FCAMRQ8WWV6 532 aa16.57■□□□□ 0.24
CLDND1-203ENST00000394181 ZMAT3Q9HA38 289 aaKnown RBP16.57■□□□□ 0.24
CLDND1-203ENST00000394181 LHX6Q9UPM6 363 aa16.57■□□□□ 0.24
CLDND1-203ENST00000394181 ACACAQ13085 2346 aa16.57■□□□□ 0.24
CLDND1-203ENST00000394181 PIEZO2Q9H5I5 2752 aa16.56■□□□□ 0.24
CLDND1-203ENST00000394181 CACNA1GO43497 2377 aa16.56■□□□□ 0.24
CLDND1-203ENST00000394181 ARHGAP21Q5T5U3 1957 aa16.56■□□□□ 0.24
CLDND1-203ENST00000394181 FCER2P06734 321 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms