RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 ZNF582Q96NG8 517 aaPredicted RBP16.91■□□□□ 0.3
CCDC50-202ENST00000392456 SNHG12Q9BXW3 62 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 TMEM185BQ9H7F4 350 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 MED12Q93074 2177 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 LOC101059948A0A1B0GTJ6 334 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 KANTRA0A1W2PQU2 76 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 UNC119BA6NIH7 251 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 BCL2L11O43521 198 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 IFNA17P01571 189 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 SFTPBP07988 381 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 EFNB1P98172 346 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 WBP2NLQ6ICG8 309 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 NDUFAF7Q7L592 441 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 ATG4DQ86TL0 474 aaPredicted RBP16.91■□□□□ 0.3
CCDC50-202ENST00000392456 SDR9C7Q8NEX9 313 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 ZNF563Q8TA94 476 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 RNFT2Q96EX2 444 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 OR51V1Q9H2C8 321 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 MMP26Q9NRE1 261 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 GRHPRQ9UBQ7 328 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 DVL2O14641 736 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 HSPA12AO43301 675 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 SLC2A10O95528 541 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 NUDT14O95848 222 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 BMP7P18075 431 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 GXYLT1Q4G148 440 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 OR10K2Q6IF99 312 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 DEGS2Q6QHC5 323 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 ASCL5Q7RTU5 278 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 ZNF485Q8NCK3 441 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 OR52B4Q8NGK2 314 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 OR5R1Q8NH85 324 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 FGF11Q92914 225 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 PRRX2Q99811 253 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 TRAV14DV4A0A0A6YYC5 116 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 CDC40O60508 579 aaKnown RBP eCLIP16.9■□□□□ 0.3
CCDC50-202ENST00000392456 TACR3P29371 465 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 DLSTP36957 453 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 EGR4Q05215 589 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 KIAA0141Q14154 515 aaPredicted RBP16.9■□□□□ 0.3
CCDC50-202ENST00000392456 C5orf24Q7Z6I8 188 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 OR4F15Q8NGB8 312 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 OIT3Q8WWZ8 545 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 C22orf15Q8WYQ4 148 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 MRGPRX4Q96LA9 322 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 TNFRSF13CQ96RJ3 184 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 OR52D1Q9H346 318 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 MMP25Q9NPA2 562 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 MRPL15Q9P015 296 aaKnown RBP16.9■□□□□ 0.3
CCDC50-202ENST00000392456 SIGLEC7Q9Y286 467 aa16.9■□□□□ 0.3
CCDC50-202ENST00000392456 EML6Q6ZMW3 1958 aa16.89■□□□□ 0.3
CCDC50-202ENST00000392456 ZNF726A6NNF4 738 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 CYTIPO60759 359 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 SERPINA5P05154 406 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 RAB40ALP0C0E4 278 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 ZNF546Q86UE3 836 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 OR5W2Q8NH69 310 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 ISOC2Q96AB3 205 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 ZNF471Q9BX82 626 aaPredicted RBP16.89■□□□□ 0.29
CCDC50-202ENST00000392456 PARD6GQ9BYG4 376 aaPredicted RBP16.89■□□□□ 0.29
CCDC50-202ENST00000392456 CCDC86Q9H6F5 360 aaKnown RBP16.89■□□□□ 0.29
CCDC50-202ENST00000392456 AUNIPQ9H7T9 357 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 MRPS18AQ9NVS2 196 aaKnown RBP16.89■□□□□ 0.29
CCDC50-202ENST00000392456 ASB6Q9NWX5 421 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 IL17BQ9UHF5 180 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 FBXL4Q9UKA2 621 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 RCE1Q9Y256 329 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 AKAP13Q12802 2813 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 NAP1L6A6NFF2 107 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 SEC14L6B5MCN3 397 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 RPL36A-HNRNPH2H7BZ11 118 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 FBXO45P0C2W1 286 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 PTGDSP41222 190 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 RBM34P42696 430 aaKnown RBP16.89■□□□□ 0.29
CCDC50-202ENST00000392456 RPS15P62841 145 aaKnown RBP16.89■□□□□ 0.29
CCDC50-202ENST00000392456 RAB40BQ12829 278 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 EXT1Q16394 746 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 DCAF10Q5QP82 559 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 DMRTA1Q5VZB9 504 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 IL34Q6ZMJ4 242 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 OR56B1Q8NGI3 324 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 M1APQ8TC57 530 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 SMIM4Q8WVI0 70 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 ADAM19Q9H013 955 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 UBQLN3Q9H347 655 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 FKRPQ9H9S5 495 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 FGF20Q9NP95 211 aaPredicted RBP16.89■□□□□ 0.29
CCDC50-202ENST00000392456 RPS10P5Q9NQ39 176 aa16.89■□□□□ 0.29
CCDC50-202ENST00000392456 GOSR2O14653 212 aa16.88■□□□□ 0.29
CCDC50-202ENST00000392456 EGR3Q06889 387 aa16.88■□□□□ 0.29
CCDC50-202ENST00000392456 PJVKQ0ZLH3 352 aa16.88■□□□□ 0.29
CCDC50-202ENST00000392456 C1QL3Q5VWW1 255 aa16.88■□□□□ 0.29
CCDC50-202ENST00000392456 GPR119Q8TDV5 335 aa16.88■□□□□ 0.29
CCDC50-202ENST00000392456 GAL3ST2Q9H3Q3 398 aa16.88■□□□□ 0.29
CCDC50-202ENST00000392456 FAM96BQ9Y3D0 163 aa16.88■□□□□ 0.29
CCDC50-202ENST00000392456 DOCK10Q96BY6 2186 aa16.88■□□□□ 0.29
CCDC50-202ENST00000392456 ELOA3DA6NLF2 546 aaPredicted RBP16.88■□□□□ 0.29
CCDC50-202ENST00000392456 HSBP1L1C9JCN9 74 aa16.88■□□□□ 0.29
CCDC50-202ENST00000392456 CTDSPLO15194 276 aa16.88■□□□□ 0.29
CCDC50-202ENST00000392456 QDPRP09417 244 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms