RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 LINC00587B1AMM8 73 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 H0YJX3 145 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 PGRMC1O00264 195 aaKnown RBP2.08□□□□□ -2.08
PTPRC-205ENST00000391970 CCL21O00585 134 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 KPNA4O00629 521 aaPredicted RBP2.08□□□□□ -2.08
PTPRC-205ENST00000391970 GOSR2O14653 212 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 AKR7A2O43488 359 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 NDUFS6O75380 124 aaKnown RBP2.08□□□□□ -2.08
PTPRC-205ENST00000391970 CIB2O75838 187 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 TRBC1P01850 177 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 IFNA4P05014 189 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 S100A8P05109 93 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 SERPIND1P05546 499 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 C2P06681 752 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 CRYGCP07315 174 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 GIPP09681 153 aaPredicted RBP2.08□□□□□ -2.08
PTPRC-205ENST00000391970 LINC00614P0C842 121 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 TDGF1P13385 188 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 CRISP2P16562 243 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 PSMC3P17980 439 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 RCC1P18754 421 aaPredicted RBP2.08□□□□□ -2.08
PTPRC-205ENST00000391970 TNNI1P19237 187 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 TCN1P20061 433 aaPredicted RBP2.08□□□□□ -2.08
PTPRC-205ENST00000391970 PRPS1L1P21108 318 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 PSMB6P28072 239 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 GABRA4P48169 554 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 PSMD8P48556 350 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 TDGF1P3P51864 188 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 NKX2-5P52952 324 aaPredicted RBP2.08□□□□□ -2.08
PTPRC-205ENST00000391970 CARD18P57730 90 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 FBXW4P57775 412 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 TAS2R60P59551 318 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 SKP1P63208 163 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 GLO1Q04760 184 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 ZNF33AQ06730 810 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 MGAT3Q09327 533 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 UNC119Q13432 240 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 HSDL1Q3SXM5 330 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 KLHL12Q53G59 568 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 LRRC10Q5BKY1 277 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 XKR4Q5GH76 650 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 NANOGP8Q6NSW7 305 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 RNASEKQ6P5S7 137 aaKnown RBP2.08□□□□□ -2.08
PTPRC-205ENST00000391970 UGT2A3Q6UWM9 527 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 TMEM107Q6UX40 140 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 MRPL52Q86TS9 123 aaKnown RBP2.08□□□□□ -2.08
PTPRC-205ENST00000391970 LINC00523Q86TU6 105 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 SETD3Q86TU7 594 aaPredicted RBP2.08□□□□□ -2.08
PTPRC-205ENST00000391970 SLC13A5Q86YT5 568 aaPredicted RBP2.08□□□□□ -2.08
PTPRC-205ENST00000391970 RNF175Q8N4F7 328 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 ZADH2Q8N4Q0 377 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 EIF4E3Q8N5X7 224 aaKnown RBP2.08□□□□□ -2.08
PTPRC-205ENST00000391970 ZNF557Q8N988 423 aaPredicted RBP2.08□□□□□ -2.08
PTPRC-205ENST00000391970 TMEM104Q8NE00 496 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 NPBQ8NG41 125 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 OR10G9Q8NGN4 311 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 OR6Q1Q8NGQ2 317 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 FAM172AQ8WUF8 416 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 OTUB2Q96DC9 234 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 RNF170Q96K19 258 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 HSFY1Q96LI6 401 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 TRNT1Q96Q11 434 aaKnown RBP2.08□□□□□ -2.08
PTPRC-205ENST00000391970 OR2M2Q96R28 347 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 CYTH2Q99418 400 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 PLIN2Q99541 437 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 KCTD14Q9BQ13 255 aaPredicted RBP2.08□□□□□ -2.08
PTPRC-205ENST00000391970 KCNS3Q9BQ31 491 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 C2orf88Q9BSF0 95 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 TMEM109Q9BVC6 243 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 TMEM59Q9BXS4 323 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 ZNF717Q9BY31 904 aaPredicted RBP2.08□□□□□ -2.08
PTPRC-205ENST00000391970 HES7Q9BYE0 225 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 BCL2L14Q9BZR8 327 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 BLZF1Q9H2G9 400 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 OR51M1Q9H341 326 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 TMBIM4Q9HC24 238 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 SAR1AQ9NR31 198 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 TAS2R1Q9NYW7 299 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 PSMC3IPQ9P2W1 217 aaPredicted RBP2.08□□□□□ -2.08
PTPRC-205ENST00000391970 STOML2Q9UJZ1 356 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 TP53TG5Q9Y2B4 290 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 USH1CQ9Y6N9 552 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 FMN2Q9NZ56 1722 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 LAMB1P07942 1786 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 DISP2A7MBM2 1401 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 DCCP43146 1447 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 CFTRP13569 1480 aa2.07□□□□□ -2.08
PTPRC-205ENST00000391970 MYH1P12882 1939 aa2.07□□□□□ -2.08
PTPRC-205ENST00000391970 YLPM1P49750 1951 aaKnown RBP2.07□□□□□ -2.08
PTPRC-205ENST00000391970 MROH2AA6NES4 1674 aa2.07□□□□□ -2.08
PTPRC-205ENST00000391970 USP54Q70EL1 1684 aa2.07□□□□□ -2.08
PTPRC-205ENST00000391970 A0A0G2JMP0 313 aa2.07□□□□□ -2.08
PTPRC-205ENST00000391970 COPEO14579 308 aa2.07□□□□□ -2.08
PTPRC-205ENST00000391970 SLC31A2O15432 143 aa2.07□□□□□ -2.08
PTPRC-205ENST00000391970 SOX15O60248 233 aa2.07□□□□□ -2.08
PTPRC-205ENST00000391970 TNFAIP8O95379 198 aa2.07□□□□□ -2.08
PTPRC-205ENST00000391970 IFNA10P01566 189 aa2.07□□□□□ -2.08
PTPRC-205ENST00000391970 TNNC2P02585 160 aa2.07□□□□□ -2.08
PTPRC-205ENST00000391970 PPBPP02775 128 aa2.07□□□□□ -2.08
PTPRC-205ENST00000391970 ALDOBP05062 364 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms