RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 TMEM269A0A1B0GVZ9 245 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 TMEM212A6NML5 194 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 TCAPO15273 167 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 CD74P04233 296 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 CSF1P09603 554 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 COX5BP10606 129 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 SFTPCP11686 197 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 ZNF823P16415 610 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 GNB3P16520 340 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 G0S2P27469 103 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 SPCS3P61009 180 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 RPS4XP62701 263 aaKnown RBP11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 GAMTQ14353 236 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 SURF2Q15527 256 aaPredicted RBP11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 ZNF101Q8IZC7 436 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 SEMA6DQ8NFY4 1073 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 SEH1LQ96EE3 360 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 SOX7Q9BT81 388 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 LRRC61Q9BV99 259 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 FOXQ1Q9C009 403 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 PARP12Q9H0J9 701 aaKnown RBP11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 UCK1Q9HA47 277 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 LRP12Q9Y561 859 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 LOC100289279A0A1B0GTE1 492 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 ZNF208O43345 1280 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 SERPINA5P05154 406 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 IGHV4-34P06331 123 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 ASAH2BP0C7U1 165 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 PNMTP11086 282 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 GP1BBP13224 206 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 TPT1P13693 172 aaKnown RBP11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 POU3F1Q03052 451 aaPredicted RBP11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 HYAL1Q12794 435 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 AWAT1Q58HT5 328 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 SLC43A2Q8N370 569 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 OR4D6Q8NGJ1 314 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 OR10D4PQ8NGN7 298 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 POM121Q96HA1 1249 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 BANF2Q9H503 90 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 OPA3Q9H6K4 179 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 C8orf33Q9H7E9 229 aaPredicted RBP11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 PTGES2Q9H7Z7 377 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 A0A087X0M5 115 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 IGKV1D-43A0A0B4J1Z2 117 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 A0A1B0GWJ7 208 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 A0A1B0GX30 115 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 PMS2P2O95744 297 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 IFNA2P01563 188 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 TNFRSF4P43489 277 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 NDUFA6P56556 154 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 MRPS10P82664 201 aaKnown RBP11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 SLC18B1Q6NT16 456 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 TMPPEQ6ZT21 453 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 ZNF584Q8IVC4 421 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 OR2I1PQ8NGU4 316 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 DCUN1D4Q92564 292 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 GABRG3Q99928 467 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 OCSTAMPQ9BR26 566 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 WASF3Q9UPY6 502 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 LTBP2Q14767 1821 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 LOC107986453A0A1B0GWG9 222 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 A0A1W2PP11 408 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 MBTPS2O43462 519 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 SRPX2O60687 465 aaPredicted RBP11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 S100A2P29034 98 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 RAB5CP51148 216 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 RELQ04864 619 aaPredicted RBP11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 SLC9A3R2Q15599 337 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 WDFY1Q8IWB7 410 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 ZNF595Q8IYB9 648 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 RNASE11Q8TAA1 199 aaKnown RBP11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 ZBTB8AQ96BR9 441 aa11.12□□□□□ -0.63
PRPF40B-202ENST00000380281 TMED7-TICAM2A0A0A6YYA0 188 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 A0A1W2PPE2 198 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 C7orf77A4D0Y5 90 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 PRSS37A4D1T9 235 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 C5orf67F2Z3F1 127 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 ZNF205O95201 554 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 FAM157CP0CG43 387 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 GLI4P10075 376 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 NUBP1P53384 320 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 SLC37A1P57057 533 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 IL13RA1P78552 427 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 FOXK1P85037 733 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 TEX30Q5JUR7 227 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 ATPAF1Q5TC12 328 aaPredicted RBP11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 CLEC1AQ8NC01 280 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 GPBAR1Q8TDU6 330 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 ASB5Q8WWX0 329 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 OR8B4Q96RC9 309 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 CST11Q9H112 138 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 ELL3Q9HB65 397 aaPredicted RBP11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 GSKIPQ9P0R6 139 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 PRODH2Q9UF12 536 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 TRBV5-5A0A0J9YX44 114 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 SPTY2D1-AS1A0A0U1RR47 76 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 DDTP30046 118 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 GLP1RP43220 463 aa11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 CSNK1EP49674 416 aaKnown RBP11.11□□□□□ -0.63
PRPF40B-202ENST00000380281 CAV2P51636 162 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms