RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 AK3Q9UIJ7 227 aa10.65□□□□□ -0.7
NPHP4-202ENST00000378161 PRAMEF26H0Y7S4 382 aa10.65□□□□□ -0.71
NPHP4-202ENST00000378161 TNFSF12O43508 249 aa10.65□□□□□ -0.71
NPHP4-202ENST00000378161 GPR137BO60478 399 aa10.65□□□□□ -0.71
NPHP4-202ENST00000378161 IFNA5P01569 189 aa10.65□□□□□ -0.71
NPHP4-202ENST00000378161 AMBPP02760 352 aa10.65□□□□□ -0.71
NPHP4-202ENST00000378161 DBIP07108 87 aaKnown RBP10.65□□□□□ -0.71
NPHP4-202ENST00000378161 FPR2P25090 351 aa10.65□□□□□ -0.71
NPHP4-202ENST00000378161 PRLHRP49683 370 aa10.65□□□□□ -0.71
NPHP4-202ENST00000378161 FOXK1P85037 733 aa10.65□□□□□ -0.71
NPHP4-202ENST00000378161 MC1RQ01726 317 aa10.65□□□□□ -0.71
NPHP4-202ENST00000378161 SNAI3Q3KNW1 292 aa10.65□□□□□ -0.71
NPHP4-202ENST00000378161 ABCA11PQ4W5N1 156 aa10.65□□□□□ -0.71
NPHP4-202ENST00000378161 PRAMEF5Q5TYX0 476 aa10.65□□□□□ -0.71
NPHP4-202ENST00000378161 PRAMEF6Q5VXH4 476 aa10.65□□□□□ -0.71
NPHP4-202ENST00000378161 RPL22L1Q6P5R6 122 aaKnown RBP10.65□□□□□ -0.71
NPHP4-202ENST00000378161 TMEM234Q8WY98 164 aa10.65□□□□□ -0.71
NPHP4-202ENST00000378161 KLF16Q9BXK1 252 aaPredicted RBP10.65□□□□□ -0.71
NPHP4-202ENST00000378161 PLAGL1Q9UM63 463 aa10.65□□□□□ -0.71
NPHP4-202ENST00000378161 M0R3H8 397 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 TAPBPO15533 448 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 CYBAP13498 195 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 SLC37A1P57057 533 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 MLF1P58340 268 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 HBA1P69905 142 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 PNRC1Q12796 327 aaPredicted RBP10.64□□□□□ -0.71
NPHP4-202ENST00000378161 IER5LQ5T953 404 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 ZNF417Q8TAU3 575 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 MIB2Q96AX9 1013 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 FAM103A1Q9BTL3 118 aaKnown RBP10.64□□□□□ -0.71
NPHP4-202ENST00000378161 SMDT1Q9H4I9 107 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 KIR3DX1Q9H7L2 352 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 SF3B6Q9Y3B4 125 aaKnown RBP10.64□□□□□ -0.71
NPHP4-202ENST00000378161 MTCH2Q9Y6C9 303 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 SDK1Q7Z5N4 2213 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 A0A1W2PNV4 684 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 GLOD5A6NK44 160 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 J3KRW8 73 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 NUDT21O43809 227 aaKnown RBP10.64□□□□□ -0.71
NPHP4-202ENST00000378161 GRK6P43250 576 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 BLKP51451 505 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 CLDN6P56747 220 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 PMPCAQ10713 525 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 C10orf91Q5T1B1 145 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 TPTE2P1Q5T6R2 138 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 ZNF761Q86XN6 746 aaPredicted RBP10.64□□□□□ -0.71
NPHP4-202ENST00000378161 ZNF439Q8NDP4 499 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 INSM2Q96T92 566 aaPredicted RBP10.64□□□□□ -0.71
NPHP4-202ENST00000378161 HCAR1Q9BXC0 346 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 ANGPTL4Q9BY76 406 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 P2RY12Q9H244 342 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 ISG20L2Q9H9L3 353 aaKnown RBP10.64□□□□□ -0.71
NPHP4-202ENST00000378161 GJD2Q9UKL4 321 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 WNT6Q9Y6F9 365 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 A0A0U1RQV5 110 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 EDDM13A0A1B0GTR0 161 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 A0A1W2PPC1 479 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 B3GALT4O96024 378 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 C8orf89P0DMQ9 161 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 ADH5P11766 374 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 GLRA1P23415 457 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 IGFBP6P24592 240 aaPredicted RBP10.64□□□□□ -0.71
NPHP4-202ENST00000378161 WASP42768 502 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 PLP1P60201 277 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 DUSP8Q13202 625 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 IAH1Q2TAA2 248 aaPredicted RBP10.64□□□□□ -0.71
NPHP4-202ENST00000378161 PRSS54Q6PEW0 395 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 OR2G3Q8NGZ4 309 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 OR2AE1Q8NHA4 323 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 OR14C36Q8NHC7 312 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 SCGB1C1Q8TD33 95 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 NEIL2Q969S2 332 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 GINS3Q9BRX5 216 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 IGFLR1Q9H665 355 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 DMRT3Q9NQL9 472 aa10.64□□□□□ -0.71
NPHP4-202ENST00000378161 MAP1LC3B2A6NCE7 125 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 A6NJY4 79 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 M0QZ24 198 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 M0R1X1 148 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 APODP05090 189 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 UMODP07911 640 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 FBXO45P0C2W1 286 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 TEAD1P28347 426 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 SIRPAP78324 504 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 NRSN1Q8IZ57 195 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 OR6T1Q8NGN1 323 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 IL17FQ96PD4 163 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 MAP1LC3BQ9GZQ8 125 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 OR51I2Q9H344 312 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 WIPI2Q9Y4P8 454 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 RBFOX3A6NFN3 312 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 JMJD7P0C870 316 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 CEACAM6P40199 344 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 PSMB10P40306 273 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 GPNMBQ14956 572 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 FBXW9Q5XUX1 488 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 OR5AR1Q8NGP9 310 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 ZNF563Q8TA94 476 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 PINX1Q96BK5 328 aaKnown RBP10.63□□□□□ -0.71
NPHP4-202ENST00000378161 NTNG2Q96CW9 530 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms