RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 C5orf63A6NC05 138 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 CD300LBA8K4G0 201 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 SPRY3O43610 288 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 SRSF10O75494 262 aaKnown RBP11.27□□□□□ -0.61
CKAP2-202ENST00000378034 VHLP40337 213 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 ACTA2P62736 377 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 ACTG2P63267 376 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 SMN1Q16637 294 aaKnown RBP11.27□□□□□ -0.61
CKAP2-202ENST00000378034 CDONQ4KMG0 1287 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 Q6ZR03 302 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 ZNF786Q8N393 782 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 OR8B12Q8NGG6 310 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 RDH5Q92781 318 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 Q96MF0 132 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 PBOV1Q9GZY1 135 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 TMEM100Q9NV29 134 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 MRPL15Q9P015 296 aaKnown RBP11.27□□□□□ -0.61
CKAP2-202ENST00000378034 ZNF319Q9P2F9 582 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 CHD3Q12873 2000 aaKnown RBP11.27□□□□□ -0.61
CKAP2-202ENST00000378034 LOC110117498-PIK3R3F6TDL0 507 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 ANOS1P23352 680 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 DCKP27707 260 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 MAGEB1P43366 347 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 CSNK2BP67870 215 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 FAM3AP98173 230 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 GALEQ14376 348 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 C6orf52Q5T4I8 152 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 LIPNQ5VXI9 398 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 IZUMO2Q6UXV1 221 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 OR5AS1Q8N127 324 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 ZNF525Q8N782 197 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 OR52I1Q8NGK6 324 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 FAM168AQ92567 244 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 GTF3AQ92664 365 aaKnown RBP11.27□□□□□ -0.61
CKAP2-202ENST00000378034 PLCXD1Q9NUJ7 323 aa11.27□□□□□ -0.61
CKAP2-202ENST00000378034 hCG_38984A0A1B0GV85 526 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 MAGEB4O15481 346 aaPredicted RBP11.26□□□□□ -0.61
CKAP2-202ENST00000378034 TPD52L2O43399 206 aaKnown RBP11.26□□□□□ -0.61
CKAP2-202ENST00000378034 FAM20BO75063 409 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 LY6HO94772 140 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 HPXP02790 462 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 ATP6V1B1P15313 513 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 CCL8P80075 99 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 TSTQ16762 297 aaKnown RBP11.26□□□□□ -0.61
CKAP2-202ENST00000378034 KLBQ86Z14 1044 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 SYS1Q8N2H4 156 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 FTMTQ8N4E7 242 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 ZNF540Q8NDQ6 660 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 CSNK2A3Q8NEV1 391 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 OR2Z1Q8NG97 314 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 C10orf105Q8TEF2 133 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 ELMOD3Q96FG2 381 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 SIGLEC11Q96RL6 698 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 SAP30LQ9HAJ7 183 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 G6PC2Q9NQR9 355 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 DLL4Q9NR61 685 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 IL19Q9UHD0 177 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 GNG8Q9UK08 70 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 OR52A1Q9UKL2 312 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 MYRFQ9Y2G1 1151 aa11.26□□□□□ -0.61
CKAP2-202ENST00000378034 EFCAB10A6NFE3 127 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 GMDSO60547 372 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 NCR1O76036 304 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 PNPP00491 289 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 PIPP12273 146 aaPredicted RBP11.25□□□□□ -0.61
CKAP2-202ENST00000378034 SLC25A16P16260 332 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 TNFRSF1AP19438 455 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 ACHEP22303 614 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 GIFP27352 417 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 CRYBB2P43320 205 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 GSK3AP49840 483 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 TNFAIP6P98066 277 aaPredicted RBP11.25□□□□□ -0.61
CKAP2-202ENST00000378034 MFGE8Q08431 387 aaPredicted RBP11.25□□□□□ -0.61
CKAP2-202ENST00000378034 MRPL28Q13084 256 aaKnown RBP11.25□□□□□ -0.61
CKAP2-202ENST00000378034 OR8B8Q15620 311 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 BCL2L15Q5TBC7 163 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 ELMOD2Q8IZ81 293 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 BHLHE23Q8NDY6 225 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 OR56B2PQ8NGI1 322 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 HAVCR2Q8TDQ0 301 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 ANKRD60Q9BZ19 345 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 ERVK13-1Q9NX77 482 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 CNOT2Q9NZN8 540 aaKnown RBP11.25□□□□□ -0.61
CKAP2-202ENST00000378034 RPP14O95059 124 aaKnown RBP11.25□□□□□ -0.61
CKAP2-202ENST00000378034 IGLV3-1P01715 115 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 MYF6P23409 242 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 TNK1Q13470 666 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 MED21Q13503 144 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 GFOD2Q3B7J2 385 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 TP53I3Q53FA7 332 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 FDX2Q6P4F2 183 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 LHFPL3Q86UP9 236 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 CATSPERDQ86XM0 798 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 CELF2-AS1Q8N7Q2 184 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 SPERTQ8NA61 448 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 RORBQ92753 470 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 PIMREGQ9BSJ6 248 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 ALG8Q9BVK2 526 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 CHODLQ9H9P2 273 aa11.25□□□□□ -0.61
CKAP2-202ENST00000378034 RAB26Q9ULW5 256 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms