RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 SLC25A38Q96DW6 304 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 MED20Q9H944 212 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 FBXO34Q9NWN3 711 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 CD207Q9UJ71 328 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 HDGFL3Q9Y3E1 203 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 NPIPA5A0A0B4J1W7 369 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 OR5H14A6NHG9 310 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 ALOX12BO75342 701 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 CELA2BP08218 269 aaPredicted RBP13.9□□□□□ -0.18
FXN-201ENST00000377270 GABRR1P24046 479 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 TFPI2P48307 235 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 ZNF136P52737 540 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 VAMP2P63027 116 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 DCST2Q5T1A1 773 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 FHL5Q5TD97 284 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 PRAMEF20Q5VT98 475 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 CD163Q86VB7 1156 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 SLC22A18ASQ8N1D0 253 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 LYG1Q8N1E2 194 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 WFIKKN1Q96NZ8 548 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 CLEC5AQ9NY25 188 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 ENTPD2Q9Y5L3 495 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 HS3ST3A1Q9Y663 406 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 V9GYS6 101 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 BRWD1Q9NSI6 2320 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 ACOT7O00154 380 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 FBXO24O75426 580 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 CSTAP01040 98 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 CAPZBP47756 277 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 OR12D2P58182 307 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 PPP1CAP62136 330 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 RPS23P62266 143 aaKnown RBP13.89□□□□□ -0.19
FXN-201ENST00000377270 C17orf67Q0P5P2 114 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 AIMP2Q13155 320 aaKnown RBP13.89□□□□□ -0.19
FXN-201ENST00000377270 EXOSC7Q15024 291 aaKnown RBP13.89□□□□□ -0.19
FXN-201ENST00000377270 BATFQ16520 125 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 GALNTL5Q7Z4T8 443 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 COX18Q8N8Q8 333 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 OR8U1Q8NH10 309 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 ZNF337Q9Y3M9 751 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 CYR61O00622 381 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 CDC42EP2O14613 210 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 KLF4O43474 513 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 GPR75O95800 540 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 PYCR1P32322 319 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 NAA10P41227 235 aaPredicted RBP13.89□□□□□ -0.19
FXN-201ENST00000377270 CBFBQ13951 182 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 TAF13Q15543 124 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 EIPR1Q53HC9 387 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 TMEM69Q5SWH9 247 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 C11orf87Q6NUJ2 197 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 CSNK1A1LQ8N752 337 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 OR14K1Q8NGZ2 314 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 C1orf216Q8TAB5 229 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 SLC37A2Q8TED4 501 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 LIPHQ8WWY8 451 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 KISS1RQ969F8 398 aaPredicted RBP13.89□□□□□ -0.19
FXN-201ENST00000377270 SAMD8Q96LT4 415 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 LPAR3Q9UBY5 353 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 KCNE5Q9UJ90 142 aa13.89□□□□□ -0.19
FXN-201ENST00000377270 A0A0J9YY10 115 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 CDHR4A6H8M9 788 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 MASP2O00187 686 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 ZNF264O43296 627 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 CTXN2P0C2S0 81 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 PTHLHP12272 177 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 TPT1P13693 172 aaKnown RBP13.88□□□□□ -0.19
FXN-201ENST00000377270 LTBRP36941 435 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 RABIFP47224 123 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 TNFSF10P50591 281 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 SRSF5Q13243 272 aaKnown RBP13.88□□□□□ -0.19
FXN-201ENST00000377270 MOGAT2Q3SYC2 334 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 S100A16Q96FQ6 103 aaKnown RBP13.88□□□□□ -0.19
FXN-201ENST00000377270 RAB33BQ9H082 229 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 SYT4Q9H2B2 425 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 ZNF430Q9H8G1 570 aaPredicted RBP13.88□□□□□ -0.19
FXN-201ENST00000377270 CAPN10Q9HC96 672 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 FOXJ3Q9UPW0 622 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 M0QZ24 198 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 DCTN6O00399 190 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 GMFGO60234 142 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 SCGNO76038 276 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 DBIP07108 87 aaKnown RBP13.88□□□□□ -0.19
FXN-201ENST00000377270 CD14P08571 375 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 FAUP35544 74 aaKnown RBP13.88□□□□□ -0.19
FXN-201ENST00000377270 C1orf61Q13536 156 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 RHEBQ15382 184 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 LY6G6FQ5SQ64 297 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 MRPL2Q5T653 305 aaKnown RBP13.88□□□□□ -0.19
FXN-201ENST00000377270 FCRLAQ7L513 359 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 TMPRSS7Q7RTY8 843 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 CDRT4Q8N9R6 151 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 OR1J1Q8NGS3 322 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 CCDC3Q9BQI4 270 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 ATG5Q9H1Y0 275 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 IL21RQ9HBE5 538 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 MSL2Q9HCI7 577 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 NRIP3Q9NQ35 241 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 ST6GALNAC2Q9UJ37 374 aa13.88□□□□□ -0.19
FXN-201ENST00000377270 PRAMEF26H0Y7S4 382 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms