RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 GGNQ86UU5 652 aa17.8■□□□□ 0.44
VSX1-202ENST00000376709 NAA40Q86UY6 237 aa17.8■□□□□ 0.44
VSX1-202ENST00000376709 C20orf196Q8IYI0 205 aa17.8■□□□□ 0.44
VSX1-202ENST00000376709 OR5AS1Q8N127 324 aa17.8■□□□□ 0.44
VSX1-202ENST00000376709 THOC3Q96J01 351 aaKnown RBP17.8■□□□□ 0.44
VSX1-202ENST00000376709 DEPPQ9NTK1 212 aa17.8■□□□□ 0.44
VSX1-202ENST00000376709 ZNF107Q9UII5 783 aaPredicted RBP17.8■□□□□ 0.44
VSX1-202ENST00000376709 MRPS28Q9Y2Q9 187 aaKnown RBP17.8■□□□□ 0.44
VSX1-202ENST00000376709 MT-CO3P00414 261 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 GIPP09681 153 aaPredicted RBP17.79■□□□□ 0.44
VSX1-202ENST00000376709 GDF1P27539 372 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 SUCLG1P53597 346 aaKnown RBP17.79■□□□□ 0.44
VSX1-202ENST00000376709 CDNFQ49AH0 187 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 C4orf46Q504U0 113 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 WIPI1Q5MNZ9 446 aaPredicted RBP17.79■□□□□ 0.44
VSX1-202ENST00000376709 ZBTB37Q5TC79 503 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 DHRS13Q6UX07 377 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 RNF144BQ7Z419 303 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 TRAPPC6BQ86SZ2 158 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 FJX1Q86VR8 437 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 UXS1Q8NBZ7 420 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 GPER1Q99527 375 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 PLEK2Q9NYT0 353 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 WIPF3A6NGB9 483 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 E9PLN8 166 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 TPOP07202 933 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 ZNF806P0C7X5 589 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 GNG2P59768 71 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 TMEM164Q5U3C3 297 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 OR4S1Q8NGB4 309 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 ZNF837Q96EG3 531 aaPredicted RBP17.79■□□□□ 0.44
VSX1-202ENST00000376709 HEXA-AS1Q9H8Q6 139 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 TMEM9BQ9NQ34 198 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 FLVCR1Q9Y5Y0 555 aa17.79■□□□□ 0.44
VSX1-202ENST00000376709 AHCTF1Q8WYP5 2266 aa17.78■□□□□ 0.44
VSX1-202ENST00000376709 TMEM14DPA8MWL7 114 aa17.78■□□□□ 0.44
VSX1-202ENST00000376709 ITGB2P05107 769 aa17.78■□□□□ 0.44
VSX1-202ENST00000376709 GNB3P16520 340 aa17.78■□□□□ 0.44
VSX1-202ENST00000376709 DLSTP36957 453 aa17.78■□□□□ 0.44
VSX1-202ENST00000376709 OR3A4PP47883 348 aa17.78■□□□□ 0.44
VSX1-202ENST00000376709 STARP49675 285 aa17.78■□□□□ 0.44
VSX1-202ENST00000376709 TSPAN5P62079 268 aa17.78■□□□□ 0.44
VSX1-202ENST00000376709 SCGB2B2Q4G0G5 96 aa17.78■□□□□ 0.44
VSX1-202ENST00000376709 TEX261Q6UWH6 196 aa17.78■□□□□ 0.44
VSX1-202ENST00000376709 MUC20Q8N307 709 aaPredicted RBP17.78■□□□□ 0.44
VSX1-202ENST00000376709 FTMTQ8N4E7 242 aa17.78■□□□□ 0.44
VSX1-202ENST00000376709 BPIFB2Q8N4F0 458 aa17.78■□□□□ 0.44
VSX1-202ENST00000376709 OR14K1Q8NGZ2 314 aa17.78■□□□□ 0.44
VSX1-202ENST00000376709 TNFAIP8L1Q8WVP5 186 aa17.78■□□□□ 0.44
VSX1-202ENST00000376709 SLC25A21Q9BQT8 299 aaPredicted RBP17.78■□□□□ 0.44
VSX1-202ENST00000376709 POFUT1Q9H488 388 aa17.78■□□□□ 0.44
VSX1-202ENST00000376709 FBLN5Q9UBX5 448 aa17.78■□□□□ 0.44
VSX1-202ENST00000376709 U3KQ87 197 aa17.78■□□□□ 0.44
VSX1-202ENST00000376709 C5orf63A6NC05 138 aa17.77■□□□□ 0.44
VSX1-202ENST00000376709 CXCL13O43927 109 aa17.77■□□□□ 0.44
VSX1-202ENST00000376709 CD74P04233 296 aa17.77■□□□□ 0.44
VSX1-202ENST00000376709 CSN2P05814 226 aa17.77■□□□□ 0.44
VSX1-202ENST00000376709 POU3F2P20265 443 aaPredicted RBP17.77■□□□□ 0.44
VSX1-202ENST00000376709 RAP2BP61225 183 aa17.77■□□□□ 0.44
VSX1-202ENST00000376709 OR10R2Q8NGX6 335 aa17.77■□□□□ 0.44
VSX1-202ENST00000376709 CCDC107Q8WV48 283 aa17.77■□□□□ 0.44
VSX1-202ENST00000376709 NUDCD2Q8WVJ2 157 aa17.77■□□□□ 0.44
VSX1-202ENST00000376709 ROBO4Q8WZ75 1007 aa17.77■□□□□ 0.44
VSX1-202ENST00000376709 PSMF1Q92530 271 aa17.77■□□□□ 0.44
VSX1-202ENST00000376709 PIPOXQ9P0Z9 390 aa17.77■□□□□ 0.44
VSX1-202ENST00000376709 LRFN1Q9P244 771 aa17.77■□□□□ 0.44
VSX1-202ENST00000376709 CCDC187A0A096LP49 1063 aa17.77■□□□□ 0.43
VSX1-202ENST00000376709 TMEM82A0PJX8 343 aa17.77■□□□□ 0.43
VSX1-202ENST00000376709 M0R135 149 aa17.77■□□□□ 0.43
VSX1-202ENST00000376709 UBE2MP61081 183 aaKnown RBP17.77■□□□□ 0.43
VSX1-202ENST00000376709 HIST1H3AP68431 136 aa17.77■□□□□ 0.43
VSX1-202ENST00000376709 MRPS34P82930 218 aaKnown RBP17.77■□□□□ 0.43
VSX1-202ENST00000376709 SPEM2Q0P670 501 aa17.77■□□□□ 0.43
VSX1-202ENST00000376709 HIST2H3PS2Q5TEC6 136 aa17.77■□□□□ 0.43
VSX1-202ENST00000376709 FAM27BQ5VT28 67 aa17.77■□□□□ 0.43
VSX1-202ENST00000376709 SPINK14Q6IE38 97 aa17.77■□□□□ 0.43
VSX1-202ENST00000376709 HIST2H3AQ71DI3 136 aa17.77■□□□□ 0.43
VSX1-202ENST00000376709 OR2W3Q7Z3T1 314 aa17.77■□□□□ 0.43
VSX1-202ENST00000376709 TMED4Q7Z7H5 227 aa17.77■□□□□ 0.43
VSX1-202ENST00000376709 OR10D3Q8NH80 312 aa17.77■□□□□ 0.43
VSX1-202ENST00000376709 FBXO17Q96EF6 278 aa17.77■□□□□ 0.43
VSX1-202ENST00000376709 ZNF799Q96GE5 643 aa17.77■□□□□ 0.43
VSX1-202ENST00000376709 LYZL4Q96KX0 146 aa17.77■□□□□ 0.43
VSX1-202ENST00000376709 SELENOIQ9C0D9 397 aa17.77■□□□□ 0.43
VSX1-202ENST00000376709 CHST6Q9GZX3 395 aa17.77■□□□□ 0.43
VSX1-202ENST00000376709 IRF2BPLQ9H1B7 796 aa17.77■□□□□ 0.43
VSX1-202ENST00000376709 CRLF2Q9HC73 371 aa17.77■□□□□ 0.43
VSX1-202ENST00000376709 RTTNQ86VV8 2226 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 A0A0U1RQV5 110 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 MPIG6BO95866 241 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 APOC1P02654 83 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 MELTFP08582 738 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 GSK3AP49840 483 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 MEF2DQ14814 521 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 NKPD1Q17RQ9 610 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 RNASE10Q5GAN6 216 aaKnown RBP17.76■□□□□ 0.43
VSX1-202ENST00000376709 DMRTC1Q5HYR2 192 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 TMEM104Q8NE00 496 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 OR2V1Q8NHB1 315 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 KCNG3Q8TAE7 436 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms