RNA–Protein interactions for RNA: ENST00000375894.9

CTSL-204, Transcript of cathepsin L, human

TSL 3

Gene CTSL, Length 975 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSL-204	ENST00000375894	PTBP3	O95758	552 aa	Known RBP	11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	HLA-DQA2	P01906	255 aa		11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	ELF3	P78545	371 aa	Predicted RBP	11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	GUCA2A	Q02747	115 aa		11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	ZNF92	Q03936	586 aa		11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	C11orf91	Q3C1V1	193 aa		11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	SLC36A3	Q495N2	470 aa		11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	IFI44L	Q53G44	452 aa		11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	FGD3	Q5JSP0	725 aa		11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	C1orf122	Q6ZSJ8	110 aa		11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	FKBP9P1	Q75LS8	142 aa		11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	CYP4Z1	Q86W10	505 aa		11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	PNKD	Q8N490	385 aa		11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	PLPP7	Q8NBV4	271 aa		11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	NPRL2	Q8WTW4	380 aa		11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	HSH2D	Q96JZ2	352 aa		11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	ERMAP	Q96PL5	475 aa	Predicted RBP	11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	GPX7	Q96SL4	187 aa	Predicted RBP	11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	CCL13	Q99616	98 aa		11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	FBLN5	Q9UBX5	448 aa		11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	B9D1	Q9UPM9	204 aa		11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	FOXJ3	Q9UPW0	622 aa		11.18	□□□□□ -0.62
CTSL-204	ENST00000375894	DNAH9	Q9NYC9	4486 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	UNC119B	A6NIH7	251 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	BBIP1	A8MTZ0	92 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	RNASEK-C17orf49	H0YIS7	233 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894		M0R135	149 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	GPR37	O15354	613 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	REN	P00797	406 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	NPPA	P01160	153 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	TROVE2	P10155	538 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	LOXL3	P58215	753 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	PCK2	Q16822	640 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	MICB	Q29980	383 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	SNAI3	Q3KNW1	292 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	COQ5	Q5HYK3	327 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	WDR38	Q5JTN6	314 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	METAP1D	Q6UB28	335 aa	Predicted RBP	11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	DPY19L2P2	Q6ZN68	376 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	TSEN54	Q7Z6J9	526 aa	Known RBP	11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	OR6V1	Q8N148	313 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	KLHDC1	Q8N7A1	406 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	FAM216B	Q8N7L0	139 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	OR4C13	Q8NGP0	309 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	SLC7A13	Q8TCU3	470 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	LRRC29	Q8WV35	223 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	SGCD	Q92629	289 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	SPTSSA	Q969W0	71 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	PPP1R14A	Q96A00	147 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	ZNF799	Q96GE5	643 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	NSRP1	Q9H0G5	558 aa	Known RBP	11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	FN3K	Q9H479	309 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	RPRD1B	Q9NQG5	326 aa	Known RBP	11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	INTS9	Q9NV88	658 aa	Known RBP	11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	C14orf119	Q9NWQ9	140 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	GID8	Q9NWU2	228 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	MRPL15	Q9P015	296 aa	Known RBP	11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	GMPR2	Q9P2T1	348 aa	Known RBP	11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	KAAG1	Q9UBP8	84 aa		11.17	□□□□□ -0.62
CTSL-204	ENST00000375894	STAB2	Q8WWQ8	2551 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894		H3BUX3	64 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	BHLHE40	O14503	412 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	GSTA4	O15217	222 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	TXNDC12	O95881	172 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	H1F0	P07305	194 aa	Known RBP	11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	ANOS1	P23352	680 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	SAA4	P35542	130 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	EFNB2	P52799	333 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	FXYD6P3	P58550	94 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	MZT1	Q08AG7	82 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	IKZF1	Q13422	519 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	LY6E	Q16553	131 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	RFX4	Q33E94	735 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	OXLD1	Q5BKU9	147 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	GLYATL3	Q5SZD4	288 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	TEX36	Q5VZQ5	186 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	METTL21C	Q5VZV1	264 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	LYG1	Q8N1E2	194 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	SPERT	Q8NA61	448 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	OR56B2P	Q8NGI1	322 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	OR8S1	Q8NH09	359 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	FANK1	Q8TC84	345 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	H1FX	Q92522	213 aa	Known RBP	11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	ITPKC	Q96DU7	683 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	ATP6V1G3	Q96LB4	118 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	NMNAT3	Q96T66	252 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	ANKRD19P	Q9H560	264 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	PNRC2	Q9NPJ4	139 aa	Known RBP	11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	ADA2	Q9NZK5	511 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	CYB5R1	Q9UHQ9	305 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	N6AMT1	Q9Y5N5	214 aa		11.16	□□□□□ -0.62
CTSL-204	ENST00000375894	LOC100653049	A0A140TA62	436 aa		11.15	□□□□□ -0.62
CTSL-204	ENST00000375894	CXCR6	O00574	342 aa		11.15	□□□□□ -0.62
CTSL-204	ENST00000375894	NDUFB3	O43676	98 aa		11.15	□□□□□ -0.62
CTSL-204	ENST00000375894	KRT34	O76011	436 aa		11.15	□□□□□ -0.62
CTSL-204	ENST00000375894	LHB	P01229	141 aa		11.15	□□□□□ -0.62
CTSL-204	ENST00000375894	VSIG10L2	P0DP72	767 aa		11.15	□□□□□ -0.62
CTSL-204	ENST00000375894	MUC1	P15941	1255 aa	Predicted RBP	11.15	□□□□□ -0.62
CTSL-204	ENST00000375894	KLF10	Q13118	480 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms