RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 OR6K6Q8NGW6 343 aa11.86□□□□□ -0.51
NELFE-201ENST00000375425 UPRTQ96BW1 309 aa11.86□□□□□ -0.51
NELFE-201ENST00000375425 NIPSNAP1Q9BPW8 284 aa11.86□□□□□ -0.51
NELFE-201ENST00000375425 NUDT16L1Q9BRJ7 211 aaKnown RBP11.86□□□□□ -0.51
NELFE-201ENST00000375425 ADAT1Q9BUB4 502 aaKnown RBP11.86□□□□□ -0.51
NELFE-201ENST00000375425 MRPL15Q9P015 296 aaKnown RBP11.86□□□□□ -0.51
NELFE-201ENST00000375425 SOX21Q9Y651 276 aaPredicted RBP11.86□□□□□ -0.51
NELFE-201ENST00000375425 CMYA5Q8N3K9 4069 aa11.86□□□□□ -0.51
NELFE-201ENST00000375425 DHRS12A0PJE2 317 aa11.86□□□□□ -0.51
NELFE-201ENST00000375425 DNAJC9-AS1A6NH13 148 aa11.86□□□□□ -0.51
NELFE-201ENST00000375425 C3orf80F5H4A9 247 aa11.86□□□□□ -0.51
NELFE-201ENST00000375425 PHYHO14832 338 aa11.86□□□□□ -0.51
NELFE-201ENST00000375425 PTBP3O95758 552 aaKnown RBP11.86□□□□□ -0.51
NELFE-201ENST00000375425 IFNGP01579 166 aa11.86□□□□□ -0.51
NELFE-201ENST00000375425 HKR1P10072 659 aa11.86□□□□□ -0.51
NELFE-201ENST00000375425 EGR1P18146 543 aa11.86□□□□□ -0.51
NELFE-201ENST00000375425 FOXL1Q12952 345 aa11.86□□□□□ -0.51
NELFE-201ENST00000375425 LINC01590Q5TEZ4 76 aa11.86□□□□□ -0.51
NELFE-201ENST00000375425 ZMYND19Q96E35 227 aaPredicted RBP11.86□□□□□ -0.51
NELFE-201ENST00000375425 ZNF878C9JN71 531 aa11.85□□□□□ -0.51
NELFE-201ENST00000375425 PLATP00750 562 aa11.85□□□□□ -0.51
NELFE-201ENST00000375425 GRPP07492 148 aa11.85□□□□□ -0.51
NELFE-201ENST00000375425 T-ENOLP0DO92 83 aa11.85□□□□□ -0.51
NELFE-201ENST00000375425 CALB2P22676 271 aa11.85□□□□□ -0.51
NELFE-201ENST00000375425 SLC15A1P46059 708 aa11.85□□□□□ -0.51
NELFE-201ENST00000375425 MTNR1AP48039 350 aa11.85□□□□□ -0.51
NELFE-201ENST00000375425 BLVRAP53004 296 aa11.85□□□□□ -0.51
NELFE-201ENST00000375425 EIF2B1Q14232 305 aaKnown RBP11.85□□□□□ -0.51
NELFE-201ENST00000375425 KCNJ8Q15842 424 aa11.85□□□□□ -0.51
NELFE-201ENST00000375425 CD300LDQ6UXZ3 194 aa11.85□□□□□ -0.51
NELFE-201ENST00000375425 C9orf139Q6ZV77 190 aa11.85□□□□□ -0.51
NELFE-201ENST00000375425 SPERTQ8NA61 448 aa11.85□□□□□ -0.51
NELFE-201ENST00000375425 OR10G2Q8NGC3 310 aa11.85□□□□□ -0.51
NELFE-201ENST00000375425 OR56B2PQ8NGI1 322 aa11.85□□□□□ -0.51
NELFE-201ENST00000375425 SGMS2Q8NHU3 365 aa11.85□□□□□ -0.51
NELFE-201ENST00000375425 SLC25A28Q96A46 364 aa11.85□□□□□ -0.51
NELFE-201ENST00000375425 FEVQ99581 238 aa11.85□□□□□ -0.51
NELFE-201ENST00000375425 MMADHCQ9H3L0 296 aaPredicted RBP11.85□□□□□ -0.51
NELFE-201ENST00000375425 CMC2Q9NRP2 79 aa11.85□□□□□ -0.51
NELFE-201ENST00000375425 C1orf123Q9NWV4 160 aa11.85□□□□□ -0.51
NELFE-201ENST00000375425 TRAV40A0A0B4J280 105 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 FAM183AA6NL82 134 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 RIIAD1A6NNX1 92 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 C22orf46C9J442 243 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 LGALS8O00214 317 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 TNFRSF13BO14836 293 aaPredicted RBP11.84□□□□□ -0.51
NELFE-201ENST00000375425 TBX1O43435 398 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 XRCC2O43543 280 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 RAP2AP10114 183 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 ZNF3P17036 446 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 DDOSTP39656 456 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 CX3CR1P49238 355 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 NPY4RP50391 375 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 FGF12P61328 243 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 GRB2P62993 217 aaKnown RBP11.84□□□□□ -0.51
NELFE-201ENST00000375425 SLC9A3R2Q15599 337 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 OR8B8Q15620 311 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 ZNF826PQ6ZT77 177 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 DPY19L4Q7Z388 723 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 ERI1Q8IV48 349 aaKnown RBP11.84□□□□□ -0.51
NELFE-201ENST00000375425 GIPC3Q8TF64 312 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 SPSB4Q96A44 273 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 OTULINQ96BN8 352 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 SGK3Q96BR1 496 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 ASB9Q96DX5 294 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 CLPTM1LQ96KA5 538 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 LRGUKQ96M69 825 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 TECTBQ96PL2 329 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 INTS14Q96SY0 518 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 CHID1Q9BWS9 393 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 OPA3Q9H6K4 179 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 MED20Q9H944 212 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 ZMAT3Q9HA38 289 aaKnown RBP11.84□□□□□ -0.51
NELFE-201ENST00000375425 ERVK-18Q9QC07 812 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 PCDHGB1Q9Y5G3 927 aa11.84□□□□□ -0.51
NELFE-201ENST00000375425 TRAV38-1A0A0B4J264 116 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.83□□□□□ -0.52
NELFE-201ENST00000375425 A6NLC8 198 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 H3BN98 237 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 ADAM20O43506 726 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 NDUFA2O43678 99 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 FAM107AO95990 144 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 CST1P01037 141 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 ANXA2P07355 339 aaKnown RBP11.83□□□□□ -0.52
NELFE-201ENST00000375425 RNASE1P07998 156 aaKnown RBP11.83□□□□□ -0.52
NELFE-201ENST00000375425 HSD11B1P28845 292 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 GSTT1P30711 240 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 FAM3AP98173 230 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 MZT1Q08AG7 82 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 BRD3OSQ6XYD6 125 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 SLC16A9Q7RTY1 509 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 IQCF1Q8N6M8 205 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 CCDC197Q8NCU1 140 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 OR6N2Q8NGY6 317 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 TEX47Q8TBZ9 253 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 CCDC124Q96CT7 223 aaKnown RBP11.83□□□□□ -0.52
NELFE-201ENST00000375425 ABHD6Q9BV23 337 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 ZNF747Q9BV97 191 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 RASSF4Q9H2L5 321 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 TOR3AQ9H497 397 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms