RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 SULT1A4P0DMN0 295 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 RPL12P30050 165 aaKnown RBP5.88□□□□□ -1.47
SMC1A-202ENST00000375340 SHHQ15465 462 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 HIST2H3AQ71DI3 136 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 NOXO1Q8NFA2 376 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 OR10AC1Q8NH08 325 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 ZFP57Q9NU63 452 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 NOSIPQ9Y314 301 aaKnown RBP5.88□□□□□ -1.47
SMC1A-202ENST00000375340 SCAF4O95104 1147 aaKnown RBP5.88□□□□□ -1.47
SMC1A-202ENST00000375340 FAHP16930 419 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 Q6ZS52 159 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 AAED1Q7RTV5 226 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 SFT2D1Q8WV19 159 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 ARHGAP5-AS1Q96IT6 56 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 C10orf90Q96M02 699 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 A0A096LPE4 126 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 A0A1W2PPZ6 126 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 TNFRSF10CO14798 259 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 ZGLP1P0C6A0 271 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 ENPP1P22413 925 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 PPICP45877 212 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 CD226Q15762 336 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 SLC25A30Q5SVS4 291 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 RHOFQ9HBH0 211 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 NIT2Q9NQR4 276 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 TUBAL3A6NHL2 446 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 IAPPP10997 89 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 SLC25A1P53007 311 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 PIGPP57054 158 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 ADIRFQ15847 76 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 SSX2Q16385 188 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 THEM4Q5T1C6 240 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 DCAF12L2Q5VW00 463 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 TMPPEQ6ZT21 453 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 ZNF707Q96C28 371 aaPredicted RBP5.88□□□□□ -1.47
SMC1A-202ENST00000375340 RSRP1Q9BUV0 290 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 OBP2BQ9NPH6 170 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 TRAV8-7A0A075B6U6 113 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 GALP22466 123 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 AADACP22760 399 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 DUSP1P28562 367 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 TESK1Q15569 626 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 Q5BKY6 102 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 CBLN3Q6UW01 205 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 PLPP5Q8NEB5 264 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 OR6K3Q8NGY3 331 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 WIF1Q9Y5W5 379 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 C4orf17Q53FE4 359 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 C9orf50Q5SZB4 431 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 C1QL3Q5VWW1 255 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 C5orf46Q6UWT4 87 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 INTS12Q96CB8 462 aaKnown RBP5.87□□□□□ -1.47
SMC1A-202ENST00000375340 ADAT1Q9BUB4 502 aaKnown RBP5.87□□□□□ -1.47
SMC1A-202ENST00000375340 TRAPPC2LQ9UL33 140 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 CXorf51AA0A1B0GTR3 108 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 K7EQS6 105 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 SHOXO15266 292 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 ABCD3P28288 659 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 CRYBA2P53672 197 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 OR51F2Q8NH61 342 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 OR51H1Q8NH63 302 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 C11orf40Q8WZ69 217 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 RBMXL1Q96E39 390 aaKnown RBP5.87□□□□□ -1.47
SMC1A-202ENST00000375340 OR8B4Q96RC9 309 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 DSPPQ9NZW4 1301 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 RAB19A4D1S5 217 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 TSTD3H0UI37 97 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 SLC17A2O00624 439 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 OGG1O15527 345 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 ZNF354AO60765 605 aaPredicted RBP5.87□□□□□ -1.47
SMC1A-202ENST00000375340 MRPL33O75394 65 aaKnown RBP5.87□□□□□ -1.47
SMC1A-202ENST00000375340 CLDN1O95832 211 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 TMEM267Q0VDI3 215 aaPredicted RBP5.87□□□□□ -1.47
SMC1A-202ENST00000375340 OR2B11Q5JQS5 317 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 OR8G2PQ6IF36 304 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 PLK3Q9H4B4 646 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 CES1P1Q9UKY3 287 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 IGHV5-51A0A0C4DH38 117 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 NKX2-2O95096 273 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 VSIG10L2P0DP72 767 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 NANOS3P60323 173 aaKnown RBP5.87□□□□□ -1.47
SMC1A-202ENST00000375340 SOHLH1Q5JUK2 328 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 CBLN2Q8IUK8 224 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 LIN37Q96GY3 246 aaPredicted RBP5.87□□□□□ -1.47
SMC1A-202ENST00000375340 FOXQ1Q9C009 403 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 MTFP1Q9UDX5 166 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 ASCC3Q8N3C0 2202 aaKnown RBP5.87□□□□□ -1.47
SMC1A-202ENST00000375340 NME1P15531 152 aaKnown RBP5.87□□□□□ -1.47
SMC1A-202ENST00000375340 TLE4Q04727 773 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 SP6Q3SY56 376 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 RPUSD3Q6P087 351 aaKnown RBP5.87□□□□□ -1.47
SMC1A-202ENST00000375340 TMEM104Q8NE00 496 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 ESRP2Q9H6T0 727 aaKnown RBP5.87□□□□□ -1.47
SMC1A-202ENST00000375340 FAM60AQ9NP50 221 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 GAB2Q9UQC2 676 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 VSIG4Q9Y279 399 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 PCDHGA9Q9Y5G4 932 aaKnown RBP5.87□□□□□ -1.47
SMC1A-202ENST00000375340 F12P00748 615 aaPredicted RBP5.87□□□□□ -1.47
SMC1A-202ENST00000375340 FOXL2P58012 376 aa5.87□□□□□ -1.47
SMC1A-202ENST00000375340 RNF4P78317 190 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms