RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 OR6N2Q8NGY6 317 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 MFSD8Q8NHS3 518 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 FRZBQ92765 325 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 RAB39BQ96DA2 213 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 SNHG12Q9BXW3 62 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 TRIM2Q9C040 744 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 TM7SF3Q9NS93 570 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 GOLT1BQ9Y3E0 138 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 YIPF1Q9Y548 306 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 TMEM269A0A1B0GVZ9 245 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 DCDC2BA2VCK2 349 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 SEC11BP0C7V7 166 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 ZNF708P17019 499 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 LMO1P25800 156 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 GDI1P31150 447 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 TRMT12Q53H54 448 aaKnown RBP11.53□□□□□ -0.56
PRPF4-201ENST00000374198 ALKBH2Q6NS38 261 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 DPY19L4Q7Z388 723 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 ZNF761Q86XN6 746 aaPredicted RBP11.53□□□□□ -0.56
PRPF4-201ENST00000374198 HLA-CQ95604 372 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 PTX4Q96A99 478 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 CMBLQ96DG6 245 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 WDR76Q9H967 626 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 TAS2R4Q9NYW5 299 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 GPR132Q9UNW8 380 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 DHDHQ9UQ10 334 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 HEATR5BQ9P2D3 2071 aa11.53□□□□□ -0.56
PRPF4-201ENST00000374198 A0A1B0GW64 132 aa11.52□□□□□ -0.56
PRPF4-201ENST00000374198 H3BQ15 152 aa11.52□□□□□ -0.56
PRPF4-201ENST00000374198 IL18BPO95998 194 aa11.52□□□□□ -0.56
PRPF4-201ENST00000374198 EDN3P14138 238 aa11.52□□□□□ -0.56
PRPF4-201ENST00000374198 GPR1P46091 355 aa11.52□□□□□ -0.56
PRPF4-201ENST00000374198 PPM1FP49593 454 aaPredicted RBP11.52□□□□□ -0.56
PRPF4-201ENST00000374198 HNRNPKP61978 463 aaKnown RBP eCLIP11.52□□□□□ -0.56
PRPF4-201ENST00000374198 SUPT4H1P63272 117 aaKnown RBP11.52□□□□□ -0.56
PRPF4-201ENST00000374198 ZNHIT3Q15649 155 aaPredicted RBP11.52□□□□□ -0.56
PRPF4-201ENST00000374198 CHST4Q8NCG5 386 aa11.52□□□□□ -0.56
PRPF4-201ENST00000374198 NAXEQ8NCW5 288 aa11.52□□□□□ -0.56
PRPF4-201ENST00000374198 DOK4Q8TEW6 326 aa11.52□□□□□ -0.56
PRPF4-201ENST00000374198 IGSF21Q96ID5 467 aa11.52□□□□□ -0.56
PRPF4-201ENST00000374198 G6PC3Q9BUM1 346 aa11.52□□□□□ -0.56
PRPF4-201ENST00000374198 ACTR3CQ9C0K3 210 aaPredicted RBP11.52□□□□□ -0.56
PRPF4-201ENST00000374198 OPN3Q9H1Y3 402 aaPredicted RBP11.52□□□□□ -0.56
PRPF4-201ENST00000374198 ARV1Q9H2C2 271 aa11.52□□□□□ -0.56
PRPF4-201ENST00000374198 SLC22A13Q9Y226 551 aa11.52□□□□□ -0.56
PRPF4-201ENST00000374198 MEMO1Q9Y316 297 aa11.52□□□□□ -0.56
PRPF4-201ENST00000374198 HSPB2A8KAH6 182 aa11.52□□□□□ -0.57
PRPF4-201ENST00000374198 ZNF264O43296 627 aa11.52□□□□□ -0.57
PRPF4-201ENST00000374198 APLNRP35414 380 aa11.52□□□□□ -0.57
PRPF4-201ENST00000374198 HSPB2Q16082 182 aa11.52□□□□□ -0.57
PRPF4-201ENST00000374198 FDX2Q6P4F2 183 aa11.52□□□□□ -0.57
PRPF4-201ENST00000374198 ULK3Q6PHR2 472 aa11.52□□□□□ -0.57
PRPF4-201ENST00000374198 ZNF550Q7Z398 422 aa11.52□□□□□ -0.57
PRPF4-201ENST00000374198 OR4N5Q8IXE1 308 aa11.52□□□□□ -0.57
PRPF4-201ENST00000374198 RNASEH2CQ8TDP1 164 aaKnown RBP11.52□□□□□ -0.57
PRPF4-201ENST00000374198 KIAA1549LQ6ZVL6 1849 aa11.52□□□□□ -0.57
PRPF4-201ENST00000374198 COL6A3P12111 3177 aa11.52□□□□□ -0.57
PRPF4-201ENST00000374198 TOX3O15405 576 aaPredicted RBP11.51□□□□□ -0.57
PRPF4-201ENST00000374198 SOX15O60248 233 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 TXNDC12O95881 172 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 CRYABP02511 175 aaKnown RBP11.51□□□□□ -0.57
PRPF4-201ENST00000374198 IGFBP3P17936 291 aaPredicted RBP11.51□□□□□ -0.57
PRPF4-201ENST00000374198 NPY4RP50391 375 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 HSD17B7P56937 341 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 UBE2KP61086 200 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 TFF2Q03403 129 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 HIKESHIQ53FT3 197 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 LRRC69Q6ZNQ3 347 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 JAGN1Q8N5M9 183 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 CSNK1A1LQ8N752 337 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 DTWD2Q8NBA8 298 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 OR2A1Q8NGT9 310 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 RELTQ969Z4 430 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 SLC25A36Q96CQ1 311 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 AMELYQ99218 206 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 SMDT1Q9H4I9 107 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 APOBEC3BQ9UH17 382 aaKnown RBP11.51□□□□□ -0.57
PRPF4-201ENST00000374198 TRANK1O15050 2925 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 EML5Q05BV3 1969 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 MASP2O00187 686 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 DLEU1O43261 78 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 PRH1P02810 166 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 CXCR1P25024 350 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 EMDP50402 254 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 SUCLG1P53597 346 aaKnown RBP11.51□□□□□ -0.57
PRPF4-201ENST00000374198 PRPS1P60891 318 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 RPS4XP62701 263 aaKnown RBP11.51□□□□□ -0.57
PRPF4-201ENST00000374198 KIRREL2Q6UWL6 708 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 ZAR1Q86SH2 424 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 AMZ2Q86W34 360 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 HSD17B11Q8NBQ5 300 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 OR51A2Q8NGJ7 313 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 OR4K15Q8NH41 348 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 ASB5Q8WWX0 329 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 PPP1R14AQ96A00 147 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 GPX7Q96SL4 187 aaPredicted RBP11.51□□□□□ -0.57
PRPF4-201ENST00000374198 RARRES2Q99969 163 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 OR11A1Q9GZK7 315 aa11.51□□□□□ -0.57
PRPF4-201ENST00000374198 C19orf53Q9UNZ5 99 aaPredicted RBP11.51□□□□□ -0.57
PRPF4-201ENST00000374198 TMEM14AQ9Y6G1 99 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms