RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 CX3CR1P49238 355 aa11.09□□□□□ -0.63
TSPAN6-201ENST00000373020 PTCRAQ6ISU1 281 aaPredicted RBP11.09□□□□□ -0.63
TSPAN6-201ENST00000373020 LIN54Q6MZP7 749 aa11.09□□□□□ -0.63
TSPAN6-201ENST00000373020 C11orf87Q6NUJ2 197 aa11.09□□□□□ -0.63
TSPAN6-201ENST00000373020 JMJD6Q6NYC1 403 aaPredicted RBP11.09□□□□□ -0.63
TSPAN6-201ENST00000373020 HOGA1Q86XE5 327 aa11.09□□□□□ -0.63
TSPAN6-201ENST00000373020 PDZD9Q8IXQ8 264 aa11.09□□□□□ -0.63
TSPAN6-201ENST00000373020 GALNT11Q8NCW6 608 aa11.09□□□□□ -0.63
TSPAN6-201ENST00000373020 OR4K17Q8NGC6 315 aa11.09□□□□□ -0.63
TSPAN6-201ENST00000373020 ST8SIA2Q92186 375 aa11.09□□□□□ -0.63
TSPAN6-201ENST00000373020 NTNG2Q96CW9 530 aa11.09□□□□□ -0.63
TSPAN6-201ENST00000373020 SESN1Q9Y6P5 492 aa11.09□□□□□ -0.63
TSPAN6-201ENST00000373020 TMEM265A0A087WTH1 108 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 CEACAM18A8MTB9 384 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 KRBOX1C9JBD0 128 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 SPDEFO95238 335 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 HPP00738 406 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 HOXD4P09016 255 aaPredicted RBP11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 QDPRP09417 244 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 LIPCP11150 499 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 SLC2A1P11166 492 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 FGF5P12034 268 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 HIST1H1DP16402 221 aaKnown RBP11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 NUP62P37198 522 aaPredicted RBP11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 ZNF133P52736 654 aaPredicted RBP11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 GRB2P62993 217 aaKnown RBP11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 SLC35A1P78382 337 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 H3F3AP84243 136 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 LYSMD4Q5XG99 296 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 CARD17Q5XLA6 110 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 GLIPR1L1Q6UWM5 242 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 FOXL2NBQ6ZUU3 175 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 DOK3Q7L591 496 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 NAA40Q86UY6 237 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 GTPBP8Q8N3Z3 284 aaPredicted RBP11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 TMEM104Q8NE00 496 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 BVESQ8NE79 360 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 KCNG3Q8TAE7 436 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 ST8SIA4Q92187 359 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 WDR13Q9H1Z4 485 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 SLC25A32Q9H2D1 315 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 SPEF1Q9Y4P9 236 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 A0A087WZY1 265 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 DBX1A6NMT0 343 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 CCSO14618 274 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 EFSO43281 561 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 BCL2L11O43521 198 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 CDC14BO60729 498 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 SFTPDP35247 375 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 OR3A4PP47883 348 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 LSM6P62312 80 aaKnown RBP11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 TAF13Q15543 124 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 TMEM176BQ3YBM2 270 aaPredicted RBP11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 PLAC9Q5JTB6 97 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 VAX1Q5SQQ9 334 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 C10orf128Q5T292 105 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 TMPPEQ6ZT21 453 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 ZNF101Q8IZC7 436 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 OR14K1Q8NGZ2 314 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 PPP1R1CQ8WVI7 109 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 FBXW5Q969U6 566 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 SPACA5Q96QH8 159 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 PHB2Q99623 299 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 PPA2Q9H2U2 334 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 AKIRIN1Q9H9L7 192 aaPredicted RBP11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 RASL12Q9NYN1 266 aa11.08□□□□□ -0.64
TSPAN6-201ENST00000373020 PI4KAP42356 2102 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 IGKV1-9A0A0C4DH69 117 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 MFNGO00587 321 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 TP53I11O14683 189 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 DUS4LO95620 317 aaKnown RBP11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 NR2C1P13056 603 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 PNLIPRP3Q17RR3 467 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 ACTBL2Q562R1 376 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 CRIP3Q6Q6R5 217 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 ADAD2Q8NCV1 583 aaKnown RBP11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 OR2I1PQ8NGU4 316 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 TMEM59Q9BXS4 323 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 OCIAD1Q9NX40 245 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 COMMD9Q9P000 198 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 NXT1Q9UKK6 140 aaKnown RBP11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 ZNF726A6NNF4 738 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 SULT2B1O00204 365 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 MPIG6BO95866 241 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 DCNP07585 359 aaKnown RBP11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 PRF1P14222 555 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 ALDH3B1P43353 468 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 ATP1B3P54709 279 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 TMEM50BP56557 158 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 TAS2R31P59538 309 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 IL13RA1P78552 427 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 FAM189A2Q15884 450 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 MICBQ29980 383 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 PRAMEF20Q5VT98 475 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 Q6ZSR3 168 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 COMMD2Q86X83 199 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 ARRDC1Q8N5I2 433 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 NAT6Q93015 286 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 TMEM54Q969K7 222 aa11.07□□□□□ -0.64
TSPAN6-201ENST00000373020 RAB3CQ96E17 227 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms