RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 RPS2P15880 293 aaKnown RBP8.53□□□□□ -1.04
SF3A3-201ENST00000373019 ZNF708P17019 499 aa8.53□□□□□ -1.04
SF3A3-201ENST00000373019 CDKN1BP46527 198 aa8.53□□□□□ -1.04
SF3A3-201ENST00000373019 C1orf194Q5T5A4 169 aa8.53□□□□□ -1.04
SF3A3-201ENST00000373019 DEGS2Q6QHC5 323 aa8.53□□□□□ -1.04
SF3A3-201ENST00000373019 KIRREL2Q6UWL6 708 aa8.53□□□□□ -1.04
SF3A3-201ENST00000373019 Q6ZVU0 165 aa8.53□□□□□ -1.04
SF3A3-201ENST00000373019 ZNF550Q7Z398 422 aa8.53□□□□□ -1.04
SF3A3-201ENST00000373019 SLC35E3Q7Z769 313 aa8.53□□□□□ -1.04
SF3A3-201ENST00000373019 ZNF761Q86XN6 746 aaPredicted RBP8.53□□□□□ -1.04
SF3A3-201ENST00000373019 KIR2DL5AQ8N109 375 aa8.53□□□□□ -1.04
SF3A3-201ENST00000373019 SLC16A11Q8NCK7 471 aa8.53□□□□□ -1.04
SF3A3-201ENST00000373019 OR51A2Q8NGJ7 313 aa8.53□□□□□ -1.04
SF3A3-201ENST00000373019 OR6K6Q8NGW6 343 aa8.53□□□□□ -1.04
SF3A3-201ENST00000373019 ERGIC1Q969X5 290 aa8.53□□□□□ -1.04
SF3A3-201ENST00000373019 OR2AG1Q9H205 316 aa8.53□□□□□ -1.04
SF3A3-201ENST00000373019 MRPS18BQ9Y676 258 aaKnown RBP8.53□□□□□ -1.04
SF3A3-201ENST00000373019 A0A1B0GV50 99 aa8.52□□□□□ -1.04
SF3A3-201ENST00000373019 TLCD2A6NGC4 264 aa8.52□□□□□ -1.04
SF3A3-201ENST00000373019 RRP8O43159 456 aaKnown RBP8.52□□□□□ -1.04
SF3A3-201ENST00000373019 TGOLN2O43493 480 aa8.52□□□□□ -1.04
SF3A3-201ENST00000373019 MBPP02686 304 aaPredicted RBP8.52□□□□□ -1.04
SF3A3-201ENST00000373019 RPL12P30050 165 aaKnown RBP8.52□□□□□ -1.04
SF3A3-201ENST00000373019 APOBEC1P41238 236 aaKnown RBP8.52□□□□□ -1.04
SF3A3-201ENST00000373019 MC3RP41968 323 aa8.52□□□□□ -1.04
SF3A3-201ENST00000373019 RPL29P47914 159 aaKnown RBP8.52□□□□□ -1.04
SF3A3-201ENST00000373019 UBE2KP61086 200 aa8.52□□□□□ -1.04
SF3A3-201ENST00000373019 CCL20P78556 96 aa8.52□□□□□ -1.04
SF3A3-201ENST00000373019 PCK2Q16822 640 aa8.52□□□□□ -1.04
SF3A3-201ENST00000373019 TMEM128Q5BJH2 165 aa8.52□□□□□ -1.04
SF3A3-201ENST00000373019 ZNF793Q6ZN11 406 aa8.52□□□□□ -1.04
SF3A3-201ENST00000373019 ZNF283Q8N7M2 679 aa8.52□□□□□ -1.04
SF3A3-201ENST00000373019 LINC01555Q8NAE3 123 aa8.52□□□□□ -1.04
SF3A3-201ENST00000373019 KREMEN2Q8NCW0 462 aa8.52□□□□□ -1.04
SF3A3-201ENST00000373019 UBE2E3Q969T4 207 aa8.52□□□□□ -1.04
SF3A3-201ENST00000373019 IL17FQ96PD4 163 aa8.52□□□□□ -1.04
SF3A3-201ENST00000373019 URM1Q9BTM9 101 aaKnown RBP8.52□□□□□ -1.04
SF3A3-201ENST00000373019 NCOR1P1Q9H4R4 102 aa8.52□□□□□ -1.04
SF3A3-201ENST00000373019 C5orf66Q9H5L9 145 aa8.52□□□□□ -1.04
SF3A3-201ENST00000373019 C6orf106Q9H6K1 298 aaPredicted RBP8.52□□□□□ -1.04
SF3A3-201ENST00000373019 CDH20Q9HBT6 801 aa8.52□□□□□ -1.04
SF3A3-201ENST00000373019 IER3IP1Q9Y5U9 82 aa8.52□□□□□ -1.04
SF3A3-201ENST00000373019 KNL1Q8NG31 2342 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 A0A0A6YYD5 115 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 C4orf47A7E2U8 309 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 TBL1XO60907 577 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 IL6RP08887 468 aaPredicted RBP8.52□□□□□ -1.05
SF3A3-201ENST00000373019 PLAURQ03405 335 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 GPM6BQ13491 265 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 ENPP2Q13822 863 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 SLC9A3R2Q15599 337 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 ULK3Q6PHR2 472 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 MTSS1LQ765P7 747 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 GALNTL5Q7Z4T8 443 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 HOGA1Q86XE5 327 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 KDM8Q8N371 416 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 NUP43Q8NFH3 380 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 OR13C3Q8NGS6 347 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 MFSD8Q8NHS3 518 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 FIBINQ8TAL6 211 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 NMNAT2Q9BZQ4 307 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 ZNF576Q9H609 170 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 K7EPK0 472 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 COCHO43405 550 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 DIRAS3O95661 229 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 OR5AC1P0C628 307 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 IRF1P10914 325 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 MDKP21741 143 aaPredicted RBP8.52□□□□□ -1.05
SF3A3-201ENST00000373019 SERPINA4P29622 427 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 FCGR2CP31995 323 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 CAMLGP49069 296 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 S100A10P60903 97 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 TANGO2Q6ICL3 276 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 ZNF679Q8IYX0 411 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 FAM71E2Q8N5Q1 922 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 OR56A1Q8NGH5 318 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 OR4K15Q8NH41 348 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 AQP3Q92482 292 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 C2orf50Q96LR7 162 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 PBDC1Q9BVG4 233 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 DPEP2Q9H4A9 486 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 FLRT3Q9NZU0 649 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 B4GALT6Q9UBX8 382 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 OR52A1Q9UKL2 312 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 POLR3KQ9Y2Y1 108 aaPredicted RBP8.52□□□□□ -1.05
SF3A3-201ENST00000373019 MED31Q9Y3C7 131 aa8.52□□□□□ -1.05
SF3A3-201ENST00000373019 ZNF217O75362 1048 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 NXPH2O95156 264 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 NSA2O95478 260 aaKnown RBP8.51□□□□□ -1.05
SF3A3-201ENST00000373019 PCCBP05166 539 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 SEC11BP0C7V7 166 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 FOSL2P15408 326 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 FUT3P21217 361 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 GDI1P31150 447 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 SLC6A6P31641 620 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 SLC37A1P57057 533 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 FOXF1Q12946 379 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 TCTN1Q2MV58 587 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 PLPP4Q5VZY2 271 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 SLC16A14Q7RTX9 510 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms