RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 NDUFS8O00217 210 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 RPP14O95059 124 aaKnown RBP12.62□□□□□ -0.39
COL9A1-204ENST00000370496 FADS2O95864 444 aaKnown RBP12.62□□□□□ -0.39
COL9A1-204ENST00000370496 ACTA2P62736 377 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 ACTG2P63267 376 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 ZNF85Q03923 595 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 RAB40BQ12829 278 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 TP53I3Q53FA7 332 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 C6orf52Q5T4I8 152 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 IZUMO2Q6UXV1 221 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 Q6ZR03 302 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 DNM1P46Q6ZS02 220 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 ACBD7Q8N6N7 88 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 OR13G1Q8NGZ3 307 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 C10orf105Q8TEF2 133 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 RDH5Q92781 318 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 SPSB4Q96A44 273 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 MYCBPQ99417 103 aaPredicted RBP12.62□□□□□ -0.39
COL9A1-204ENST00000370496 ADAT1Q9BUB4 502 aaKnown RBP12.62□□□□□ -0.39
COL9A1-204ENST00000370496 REPIN1Q9BWE0 567 aaKnown RBP12.62□□□□□ -0.39
COL9A1-204ENST00000370496 PBOV1Q9GZY1 135 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 ZNF391Q9UJN7 358 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 EXOGQ9Y2C4 368 aaKnown RBP12.62□□□□□ -0.39
COL9A1-204ENST00000370496 NOP16Q9Y3C1 178 aaKnown RBP12.62□□□□□ -0.39
COL9A1-204ENST00000370496 R4GMQ9 66 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 FLNAP21333 2647 aaKnown RBP12.62□□□□□ -0.39
COL9A1-204ENST00000370496 IGHV1-69-2A0A0G2JMI3 117 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 hCG_38984A0A1B0GV85 526 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 METTL15A6NJ78 407 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 ACOD1A6NK06 481 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 RNF223E7ERA6 249 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 LYNX1G3V0Z9 82 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 CDC14BO60729 498 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 LILRA1O75019 489 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 SULT1C4O75897 302 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 CD55P08174 381 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 ADH4P08319 380 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 LYNX1P0DP58 116 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 CD99P14209 185 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 SLC25A16P16260 332 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 ACHEP22303 614 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 MMP16P51512 607 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 CDK5R2Q13319 367 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 KLHL22Q53GT1 634 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 ZNF786Q8N393 782 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 FTMTQ8N4E7 242 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 SGK3Q96BR1 496 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 SLC30A2Q9BRI3 323 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 CHODLQ9H9P2 273 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 ACOXLQ9NUZ1 547 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 TMEM100Q9NV29 134 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 ZNF319Q9P2F9 582 aa12.61□□□□□ -0.39
COL9A1-204ENST00000370496 NUFIP1Q9UHK0 495 aaKnown RBP12.61□□□□□ -0.39
COL9A1-204ENST00000370496 IRGMA1A4Y4 181 aa12.6□□□□□ -0.39
COL9A1-204ENST00000370496 ANKRD30BLA7E2S9 258 aa12.6□□□□□ -0.39
COL9A1-204ENST00000370496 J3QRE1 110 aa12.6□□□□□ -0.39
COL9A1-204ENST00000370496 SMAD7O15105 426 aaKnown RBP12.6□□□□□ -0.39
COL9A1-204ENST00000370496 RRP9O43818 475 aaKnown RBP12.6□□□□□ -0.39
COL9A1-204ENST00000370496 HSPA13P48723 471 aa12.6□□□□□ -0.39
COL9A1-204ENST00000370496 GSK3AP49840 483 aa12.6□□□□□ -0.39
COL9A1-204ENST00000370496 ISL1P61371 349 aa12.6□□□□□ -0.39
COL9A1-204ENST00000370496 MRPS11P82912 194 aaKnown RBP12.6□□□□□ -0.39
COL9A1-204ENST00000370496 FAM3AP98173 230 aa12.6□□□□□ -0.39
COL9A1-204ENST00000370496 OR52I1Q8NGK6 324 aa12.6□□□□□ -0.39
COL9A1-204ENST00000370496 TFAP2CQ92754 450 aa12.6□□□□□ -0.39
COL9A1-204ENST00000370496 OR2V2Q96R30 315 aa12.6□□□□□ -0.39
COL9A1-204ENST00000370496 ALG8Q9BVK2 526 aa12.6□□□□□ -0.39
COL9A1-204ENST00000370496 SLC22A4Q9H015 551 aa12.6□□□□□ -0.39
COL9A1-204ENST00000370496 INPP5EQ9NRR6 644 aa12.6□□□□□ -0.39
COL9A1-204ENST00000370496 MRPL15Q9P015 296 aaKnown RBP12.6□□□□□ -0.39
COL9A1-204ENST00000370496 IL19Q9UHD0 177 aa12.6□□□□□ -0.39
COL9A1-204ENST00000370496 OR52A1Q9UKL2 312 aa12.6□□□□□ -0.39
COL9A1-204ENST00000370496 MYRFQ9Y2G1 1151 aa12.6□□□□□ -0.39
COL9A1-204ENST00000370496 SNX5Q9Y5X3 404 aa12.6□□□□□ -0.39
COL9A1-204ENST00000370496 MAP1AP78559 2803 aaPredicted RBP12.6□□□□□ -0.39
COL9A1-204ENST00000370496 A0A0U1RQV5 110 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 MLNRO43193 412 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 FAM20BO75063 409 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 SRSF10O75494 262 aaKnown RBP12.59□□□□□ -0.39
COL9A1-204ENST00000370496 PNPP00491 289 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 IGHA1P01876 353 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 HLA-DPB1P04440 258 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 TACSTD2P09758 323 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 TNFRSF1AP19438 455 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 CA6P23280 308 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 GNALP38405 381 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 DDOSTP39656 456 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 SRP9P49458 86 aaKnown RBP12.59□□□□□ -0.39
COL9A1-204ENST00000370496 OR8G1Q15617 311 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 OR8B8Q15620 311 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 SNCBQ16143 134 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 HFEQ30201 348 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 CDONQ4KMG0 1287 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 LIPNQ5VXI9 398 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 THAP5Q7Z6K1 395 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 ZNF540Q8NDQ6 660 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 CSNK2A3Q8NEV1 391 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 OR51E1Q8TCB6 317 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 ITLN1Q8WWA0 313 aa12.59□□□□□ -0.39
COL9A1-204ENST00000370496 DVL3Q92997 716 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms