RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 OR8B12Q8NGG6 310 aa9.04□□□□□ -0.96
TPM3-209ENST00000368527 OR52N4Q8NGI2 321 aa9.04□□□□□ -0.96
TPM3-209ENST00000368527 OR13C9Q8NGT0 318 aa9.04□□□□□ -0.96
TPM3-209ENST00000368527 C17orf50Q8WW18 174 aa9.04□□□□□ -0.96
TPM3-209ENST00000368527 RAB3CQ96E17 227 aa9.04□□□□□ -0.96
TPM3-209ENST00000368527 PHYHIPLQ96FC7 376 aa9.04□□□□□ -0.96
TPM3-209ENST00000368527 PGAM5Q96HS1 289 aa9.04□□□□□ -0.96
TPM3-209ENST00000368527 NECAB3Q96P71 396 aaPredicted RBP9.04□□□□□ -0.96
TPM3-209ENST00000368527 NPAS1Q99742 590 aa9.04□□□□□ -0.96
TPM3-209ENST00000368527 OCSTAMPQ9BR26 566 aa9.04□□□□□ -0.96
TPM3-209ENST00000368527 TMEM59Q9BXS4 323 aa9.04□□□□□ -0.96
TPM3-209ENST00000368527 ZNF160Q9HCG1 818 aa9.04□□□□□ -0.96
TPM3-209ENST00000368527 GPR84Q9NQS5 396 aa9.04□□□□□ -0.96
TPM3-209ENST00000368527 PFDN2Q9UHV9 154 aa9.04□□□□□ -0.96
TPM3-209ENST00000368527 KLK13Q9UKR3 277 aa9.04□□□□□ -0.96
TPM3-209ENST00000368527 PCDHGA1Q9Y5H4 931 aa9.04□□□□□ -0.96
TPM3-209ENST00000368527 CACNA1EQ15878 2313 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 C5orf42Q9H799 3197 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 A0A1W2PNR3 127 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 OR14I1A6ND48 311 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 TMEM235A6NFC5 223 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 SERPINE3A8MV23 424 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 H3BSH0 61 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 DHRS3O75911 302 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 STK17BO94768 372 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 DUS4LO95620 317 aaKnown RBP9.03□□□□□ -0.96
TPM3-209ENST00000368527 P04436 131 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 HCKP08631 526 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 HIST1H1DP16402 221 aaKnown RBP9.03□□□□□ -0.96
TPM3-209ENST00000368527 MGMTP16455 207 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 CXCL2P19875 107 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 OTX1P32242 354 aaPredicted RBP9.03□□□□□ -0.96
TPM3-209ENST00000368527 SFTPDP35247 375 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 RAC3P60763 192 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 PCBD1P61457 104 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 SCRN3Q0VDG4 424 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 DHRS2Q13268 280 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 UNC119Q13432 240 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 HLXQ14774 488 aaPredicted RBP9.03□□□□□ -0.96
TPM3-209ENST00000368527 SURF2Q15527 256 aaPredicted RBP9.03□□□□□ -0.96
TPM3-209ENST00000368527 PDSS1Q5T2R2 415 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 FAM27BQ5VT28 67 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 RAET1LQ5VY80 246 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 GLIPR1L1Q6UWM5 242 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 DRAM2Q6UX65 266 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 GSG1LQ6UXU4 331 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 COMMD7Q86VX2 200 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 TMEM123Q8N131 208 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 GALNT16Q8N428 558 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 PAQR4Q8N4S7 273 aaPredicted RBP9.03□□□□□ -0.96
TPM3-209ENST00000368527 FAM89BQ8N5H3 189 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 ACBD4Q8NC06 268 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 OR4D10Q8NGI6 311 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 OR5M1Q8NGP8 315 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 OR14K1Q8NGZ2 314 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 LRRC20Q8TCA0 184 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 MITD1Q8WV92 249 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 SPSB1Q96BD6 273 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 TECTBQ96PL2 329 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 GPER1Q99527 375 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 S100A13Q99584 98 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 STRADBQ9C0K7 418 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 TINAGL1Q9GZM7 467 aaPredicted RBP9.03□□□□□ -0.96
TPM3-209ENST00000368527 MFFQ9GZY8 342 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 OR10A2Q9H208 303 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 RGCCQ9H4X1 137 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 PNRC2Q9NPJ4 139 aaKnown RBP9.03□□□□□ -0.96
TPM3-209ENST00000368527 PCDHB16Q9NRJ7 776 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 SLC39A1Q9NY26 324 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 NOP16Q9Y3C1 178 aaKnown RBP9.03□□□□□ -0.96
TPM3-209ENST00000368527 HS3ST3B1Q9Y662 390 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 V9GYS6 101 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 SEC16AO15027 2179 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 RP1P56715 2156 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 FER1L5A0AVI2 2057 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 TNRC6BQ9UPQ9 1833 aaKnown RBP9.03□□□□□ -0.96
TPM3-209ENST00000368527 UNC13CQ8NB66 2214 aa9.03□□□□□ -0.96
TPM3-209ENST00000368527 ABCA7Q8IZY2 2146 aa9.02□□□□□ -0.96
TPM3-209ENST00000368527 SPTBN5Q9NRC6 3674 aaKnown RBP9.02□□□□□ -0.97
TPM3-209ENST00000368527 FXYD6-FXYD2A0A087WZ82 144 aa9.02□□□□□ -0.97
TPM3-209ENST00000368527 SHISA8B8ZZ34 492 aa9.02□□□□□ -0.97
TPM3-209ENST00000368527 KRBOX1C9JBD0 128 aa9.02□□□□□ -0.97
TPM3-209ENST00000368527 M0QYG6 137 aa9.02□□□□□ -0.97
TPM3-209ENST00000368527 ARPC5O15511 151 aa9.02□□□□□ -0.97
TPM3-209ENST00000368527 CDC14BO60729 498 aa9.02□□□□□ -0.97
TPM3-209ENST00000368527 KLF7O75840 302 aaPredicted RBP9.02□□□□□ -0.97
TPM3-209ENST00000368527 HPP00738 406 aa9.02□□□□□ -0.97
TPM3-209ENST00000368527 HLA-AP01891 365 aaKnown RBP9.02□□□□□ -0.97
TPM3-209ENST00000368527 CST2P09228 141 aa9.02□□□□□ -0.97
TPM3-209ENST00000368527 PRKACBP22694 351 aa9.02□□□□□ -0.97
TPM3-209ENST00000368527 ZBTB25P24278 435 aa9.02□□□□□ -0.97
TPM3-209ENST00000368527 ACP1P24666 158 aa9.02□□□□□ -0.97
TPM3-209ENST00000368527 SSTR2P30874 369 aa9.02□□□□□ -0.97
TPM3-209ENST00000368527 PRKXP51817 358 aa9.02□□□□□ -0.97
TPM3-209ENST00000368527 H2BFSP57053 126 aa9.02□□□□□ -0.97
TPM3-209ENST00000368527 ARPC4P59998 168 aa9.02□□□□□ -0.97
TPM3-209ENST00000368527 RAB35Q15286 201 aa9.02□□□□□ -0.97
TPM3-209ENST00000368527 SGCAQ16586 387 aa9.02□□□□□ -0.97
TPM3-209ENST00000368527 NRN1LQ496H8 165 aa9.02□□□□□ -0.97
TPM3-209ENST00000368527 SCGB2B2Q4G0G5 96 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms